Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19331 | 58216;58217;58218 | chr2:178594503;178594502;178594501 | chr2:179459230;179459229;179459228 |
N2AB | 17690 | 53293;53294;53295 | chr2:178594503;178594502;178594501 | chr2:179459230;179459229;179459228 |
N2A | 16763 | 50512;50513;50514 | chr2:178594503;178594502;178594501 | chr2:179459230;179459229;179459228 |
N2B | 10266 | 31021;31022;31023 | chr2:178594503;178594502;178594501 | chr2:179459230;179459229;179459228 |
Novex-1 | 10391 | 31396;31397;31398 | chr2:178594503;178594502;178594501 | chr2:179459230;179459229;179459228 |
Novex-2 | 10458 | 31597;31598;31599 | chr2:178594503;178594502;178594501 | chr2:179459230;179459229;179459228 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1449016899 | -1.079 | 0.999 | N | 0.554 | 0.485 | 0.550210968228 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
F/L | rs1449016899 | -1.079 | 0.999 | N | 0.554 | 0.485 | 0.550210968228 | gnomAD-4.0.0 | 2.73747E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59854E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.993 | likely_pathogenic | 0.9907 | pathogenic | -2.46 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
F/C | 0.9686 | likely_pathogenic | 0.9571 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.475038861 | None | None | N |
F/D | 0.9928 | likely_pathogenic | 0.9918 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
F/E | 0.9959 | likely_pathogenic | 0.9957 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
F/G | 0.9934 | likely_pathogenic | 0.992 | pathogenic | -2.764 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
F/H | 0.9412 | likely_pathogenic | 0.9341 | pathogenic | -0.997 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
F/I | 0.9541 | likely_pathogenic | 0.9364 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.482925673 | None | None | N |
F/K | 0.9969 | likely_pathogenic | 0.9967 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
F/L | 0.9961 | likely_pathogenic | 0.9951 | pathogenic | -1.548 | Destabilizing | 0.999 | D | 0.554 | neutral | N | 0.518940162 | None | None | N |
F/M | 0.9715 | likely_pathogenic | 0.9668 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/N | 0.9712 | likely_pathogenic | 0.9696 | pathogenic | -0.943 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
F/P | 0.9972 | likely_pathogenic | 0.9966 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
F/Q | 0.9918 | likely_pathogenic | 0.9918 | pathogenic | -1.179 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
F/R | 0.9942 | likely_pathogenic | 0.9934 | pathogenic | -0.235 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
F/S | 0.9822 | likely_pathogenic | 0.9763 | pathogenic | -1.74 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.480897757 | None | None | N |
F/T | 0.9903 | likely_pathogenic | 0.9873 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
F/V | 0.9658 | likely_pathogenic | 0.9527 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.778 | deleterious | N | 0.482418694 | None | None | N |
F/W | 0.4385 | ambiguous | 0.3931 | ambiguous | -0.829 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
F/Y | 0.1794 | likely_benign | 0.1745 | benign | -0.964 | Destabilizing | 0.999 | D | 0.525 | neutral | N | 0.470495641 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.