Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19333 | 58222;58223;58224 | chr2:178594497;178594496;178594495 | chr2:179459224;179459223;179459222 |
N2AB | 17692 | 53299;53300;53301 | chr2:178594497;178594496;178594495 | chr2:179459224;179459223;179459222 |
N2A | 16765 | 50518;50519;50520 | chr2:178594497;178594496;178594495 | chr2:179459224;179459223;179459222 |
N2B | 10268 | 31027;31028;31029 | chr2:178594497;178594496;178594495 | chr2:179459224;179459223;179459222 |
Novex-1 | 10393 | 31402;31403;31404 | chr2:178594497;178594496;178594495 | chr2:179459224;179459223;179459222 |
Novex-2 | 10460 | 31603;31604;31605 | chr2:178594497;178594496;178594495 | chr2:179459224;179459223;179459222 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs777279726 | -0.232 | 0.351 | N | 0.355 | 0.155 | 0.17258766438 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77716E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1469122729 | -0.43 | 0.001 | N | 0.182 | 0.115 | 0.134241683229 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1469122729 | -0.43 | 0.001 | N | 0.182 | 0.115 | 0.134241683229 | gnomAD-4.0.0 | 3.18422E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77685E-05 | None | 0 | 0 | 2.85992E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4496 | ambiguous | 0.3583 | ambiguous | -0.256 | Destabilizing | 0.129 | N | 0.414 | neutral | None | None | None | None | N |
K/C | 0.7095 | likely_pathogenic | 0.6688 | pathogenic | -0.38 | Destabilizing | 0.983 | D | 0.566 | neutral | None | None | None | None | N |
K/D | 0.8056 | likely_pathogenic | 0.7021 | pathogenic | 0.048 | Stabilizing | 0.418 | N | 0.489 | neutral | None | None | None | None | N |
K/E | 0.345 | ambiguous | 0.2377 | benign | 0.102 | Stabilizing | 0.351 | N | 0.338 | neutral | N | 0.42421906 | None | None | N |
K/F | 0.8535 | likely_pathogenic | 0.776 | pathogenic | -0.169 | Destabilizing | 0.836 | D | 0.575 | neutral | None | None | None | None | N |
K/G | 0.6845 | likely_pathogenic | 0.5827 | pathogenic | -0.556 | Destabilizing | 0.264 | N | 0.51 | neutral | None | None | None | None | N |
K/H | 0.3667 | ambiguous | 0.3191 | benign | -0.925 | Destabilizing | 0.836 | D | 0.553 | neutral | None | None | None | None | N |
K/I | 0.4228 | ambiguous | 0.3259 | benign | 0.482 | Stabilizing | 0.003 | N | 0.493 | neutral | N | 0.494796652 | None | None | N |
K/L | 0.4348 | ambiguous | 0.3617 | ambiguous | 0.482 | Stabilizing | 0.129 | N | 0.439 | neutral | None | None | None | None | N |
K/M | 0.3315 | likely_benign | 0.2482 | benign | 0.345 | Stabilizing | 0.836 | D | 0.55 | neutral | None | None | None | None | N |
K/N | 0.6592 | likely_pathogenic | 0.5264 | ambiguous | -0.107 | Destabilizing | 0.351 | N | 0.355 | neutral | N | 0.495911373 | None | None | N |
K/P | 0.5442 | ambiguous | 0.5 | ambiguous | 0.267 | Stabilizing | 0.836 | D | 0.583 | neutral | None | None | None | None | N |
K/Q | 0.1747 | likely_benign | 0.1474 | benign | -0.272 | Destabilizing | 0.351 | N | 0.415 | neutral | N | 0.450581728 | None | None | N |
K/R | 0.0756 | likely_benign | 0.0736 | benign | -0.383 | Destabilizing | 0.001 | N | 0.182 | neutral | N | 0.4010197 | None | None | N |
K/S | 0.6295 | likely_pathogenic | 0.5181 | ambiguous | -0.712 | Destabilizing | 0.01 | N | 0.226 | neutral | None | None | None | None | N |
K/T | 0.2714 | likely_benign | 0.1873 | benign | -0.478 | Destabilizing | 0.101 | N | 0.415 | neutral | N | 0.450157654 | None | None | N |
K/V | 0.3645 | ambiguous | 0.2882 | benign | 0.267 | Stabilizing | 0.004 | N | 0.411 | neutral | None | None | None | None | N |
K/W | 0.8146 | likely_pathogenic | 0.7399 | pathogenic | -0.07 | Destabilizing | 0.983 | D | 0.584 | neutral | None | None | None | None | N |
K/Y | 0.7265 | likely_pathogenic | 0.635 | pathogenic | 0.24 | Stabilizing | 0.94 | D | 0.577 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.