Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19334 | 58225;58226;58227 | chr2:178594494;178594493;178594492 | chr2:179459221;179459220;179459219 |
N2AB | 17693 | 53302;53303;53304 | chr2:178594494;178594493;178594492 | chr2:179459221;179459220;179459219 |
N2A | 16766 | 50521;50522;50523 | chr2:178594494;178594493;178594492 | chr2:179459221;179459220;179459219 |
N2B | 10269 | 31030;31031;31032 | chr2:178594494;178594493;178594492 | chr2:179459221;179459220;179459219 |
Novex-1 | 10394 | 31405;31406;31407 | chr2:178594494;178594493;178594492 | chr2:179459221;179459220;179459219 |
Novex-2 | 10461 | 31606;31607;31608 | chr2:178594494;178594493;178594492 | chr2:179459221;179459220;179459219 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs546716167 | -2.111 | 0.966 | N | 0.579 | 0.433 | 0.839459519749 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
V/D | rs546716167 | -2.111 | 0.966 | N | 0.579 | 0.433 | 0.839459519749 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.1425E-04 | 0 |
V/D | rs546716167 | -2.111 | 0.966 | N | 0.579 | 0.433 | 0.839459519749 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
V/D | rs546716167 | -2.111 | 0.966 | N | 0.579 | 0.433 | 0.839459519749 | gnomAD-4.0.0 | 8.67741E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.42791E-04 | 1.60087E-05 |
V/I | None | -0.649 | 0.801 | N | 0.459 | 0.203 | 0.469496741337 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 1.29232E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | None | -0.649 | 0.801 | N | 0.459 | 0.203 | 0.469496741337 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | None | -0.649 | 0.801 | N | 0.459 | 0.203 | 0.469496741337 | gnomAD-4.0.0 | 2.47943E-06 | None | None | None | None | N | None | 2.67001E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.19674E-05 | 0 |
V/L | rs769006307 | None | 0.625 | N | 0.439 | 0.217 | 0.360163838653 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 1.31165E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs769006307 | None | 0.625 | N | 0.439 | 0.217 | 0.360163838653 | gnomAD-4.0.0 | 3.09928E-06 | None | None | None | None | N | None | 0 | 3.33656E-05 | None | 0 | 0 | None | 0 | 0 | 1.69555E-06 | 0 | 1.60133E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3467 | ambiguous | 0.3202 | benign | -1.43 | Destabilizing | 0.005 | N | 0.221 | neutral | N | 0.439135371 | None | None | N |
V/C | 0.8089 | likely_pathogenic | 0.8076 | pathogenic | -1.121 | Destabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
V/D | 0.8341 | likely_pathogenic | 0.7478 | pathogenic | -1.01 | Destabilizing | 0.966 | D | 0.579 | neutral | N | 0.480941118 | None | None | N |
V/E | 0.6874 | likely_pathogenic | 0.6025 | pathogenic | -0.95 | Destabilizing | 0.842 | D | 0.513 | neutral | None | None | None | None | N |
V/F | 0.4409 | ambiguous | 0.3206 | benign | -0.957 | Destabilizing | 0.989 | D | 0.523 | neutral | N | 0.471658273 | None | None | N |
V/G | 0.5768 | likely_pathogenic | 0.4893 | ambiguous | -1.8 | Destabilizing | 0.002 | N | 0.474 | neutral | N | 0.484157122 | None | None | N |
V/H | 0.8765 | likely_pathogenic | 0.8127 | pathogenic | -1.219 | Destabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | N |
V/I | 0.0862 | likely_benign | 0.0816 | benign | -0.495 | Destabilizing | 0.801 | D | 0.459 | neutral | N | 0.468610129 | None | None | N |
V/K | 0.781 | likely_pathogenic | 0.6948 | pathogenic | -1.195 | Destabilizing | 0.842 | D | 0.521 | neutral | None | None | None | None | N |
V/L | 0.3109 | likely_benign | 0.2628 | benign | -0.495 | Destabilizing | 0.625 | D | 0.439 | neutral | N | 0.458835852 | None | None | N |
V/M | 0.2912 | likely_benign | 0.2355 | benign | -0.523 | Destabilizing | 0.991 | D | 0.476 | neutral | None | None | None | None | N |
V/N | 0.6842 | likely_pathogenic | 0.5981 | pathogenic | -1.149 | Destabilizing | 0.974 | D | 0.594 | neutral | None | None | None | None | N |
V/P | 0.914 | likely_pathogenic | 0.8697 | pathogenic | -0.771 | Destabilizing | 0.974 | D | 0.577 | neutral | None | None | None | None | N |
V/Q | 0.7215 | likely_pathogenic | 0.6543 | pathogenic | -1.188 | Destabilizing | 0.974 | D | 0.587 | neutral | None | None | None | None | N |
V/R | 0.7857 | likely_pathogenic | 0.7005 | pathogenic | -0.792 | Destabilizing | 0.974 | D | 0.596 | neutral | None | None | None | None | N |
V/S | 0.5943 | likely_pathogenic | 0.521 | ambiguous | -1.753 | Destabilizing | 0.728 | D | 0.505 | neutral | None | None | None | None | N |
V/T | 0.4286 | ambiguous | 0.3832 | ambiguous | -1.555 | Destabilizing | 0.842 | D | 0.429 | neutral | None | None | None | None | N |
V/W | 0.9638 | likely_pathogenic | 0.9338 | pathogenic | -1.169 | Destabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
V/Y | 0.8278 | likely_pathogenic | 0.7511 | pathogenic | -0.848 | Destabilizing | 0.991 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.