Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19335 | 58228;58229;58230 | chr2:178594491;178594490;178594489 | chr2:179459218;179459217;179459216 |
N2AB | 17694 | 53305;53306;53307 | chr2:178594491;178594490;178594489 | chr2:179459218;179459217;179459216 |
N2A | 16767 | 50524;50525;50526 | chr2:178594491;178594490;178594489 | chr2:179459218;179459217;179459216 |
N2B | 10270 | 31033;31034;31035 | chr2:178594491;178594490;178594489 | chr2:179459218;179459217;179459216 |
Novex-1 | 10395 | 31408;31409;31410 | chr2:178594491;178594490;178594489 | chr2:179459218;179459217;179459216 |
Novex-2 | 10462 | 31609;31610;31611 | chr2:178594491;178594490;178594489 | chr2:179459218;179459217;179459216 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs752763361 | None | 0.061 | N | 0.241 | 0.129 | 0.141422826196 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | rs878924097 | 0.014 | 0.988 | N | 0.68 | 0.357 | 0.399889258716 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs878924097 | 0.014 | 0.988 | N | 0.68 | 0.357 | 0.399889258716 | gnomAD-4.0.0 | 4.77661E-06 | None | None | None | None | N | None | 0 | 2.28802E-05 | None | 0 | 0 | None | 0 | 0 | 2.86E-06 | 1.43357E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1841 | likely_benign | 0.1158 | benign | -1.148 | Destabilizing | 0.061 | N | 0.241 | neutral | N | 0.464111173 | None | None | N |
T/C | 0.4725 | ambiguous | 0.4128 | ambiguous | -0.778 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
T/D | 0.6503 | likely_pathogenic | 0.5113 | ambiguous | -0.366 | Destabilizing | 0.969 | D | 0.627 | neutral | None | None | None | None | N |
T/E | 0.6647 | likely_pathogenic | 0.4867 | ambiguous | -0.271 | Destabilizing | 0.939 | D | 0.592 | neutral | None | None | None | None | N |
T/F | 0.7067 | likely_pathogenic | 0.4835 | ambiguous | -1.066 | Destabilizing | 0.997 | D | 0.671 | neutral | None | None | None | None | N |
T/G | 0.3253 | likely_benign | 0.2542 | benign | -1.49 | Destabilizing | 0.02 | N | 0.453 | neutral | None | None | None | None | N |
T/H | 0.5728 | likely_pathogenic | 0.4215 | ambiguous | -1.66 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
T/I | 0.5233 | ambiguous | 0.3223 | benign | -0.294 | Destabilizing | 0.988 | D | 0.68 | prob.neutral | N | 0.498877108 | None | None | N |
T/K | 0.633 | likely_pathogenic | 0.4026 | ambiguous | -0.648 | Destabilizing | 0.134 | N | 0.449 | neutral | N | 0.476442965 | None | None | N |
T/L | 0.3596 | ambiguous | 0.2167 | benign | -0.294 | Destabilizing | 0.939 | D | 0.587 | neutral | None | None | None | None | N |
T/M | 0.2734 | likely_benign | 0.16 | benign | -0.118 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
T/N | 0.2376 | likely_benign | 0.1833 | benign | -0.898 | Destabilizing | 0.969 | D | 0.63 | neutral | None | None | None | None | N |
T/P | 0.4651 | ambiguous | 0.3478 | ambiguous | -0.546 | Destabilizing | 0.996 | D | 0.679 | prob.neutral | N | 0.518599019 | None | None | N |
T/Q | 0.5409 | ambiguous | 0.3659 | ambiguous | -0.873 | Destabilizing | 0.982 | D | 0.674 | neutral | None | None | None | None | N |
T/R | 0.6126 | likely_pathogenic | 0.3592 | ambiguous | -0.628 | Destabilizing | 0.852 | D | 0.63 | neutral | N | 0.46780084 | None | None | N |
T/S | 0.1688 | likely_benign | 0.1398 | benign | -1.265 | Destabilizing | 0.704 | D | 0.562 | neutral | N | 0.449563008 | None | None | N |
T/V | 0.3577 | ambiguous | 0.2366 | benign | -0.546 | Destabilizing | 0.939 | D | 0.572 | neutral | None | None | None | None | N |
T/W | 0.8924 | likely_pathogenic | 0.791 | pathogenic | -1.003 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
T/Y | 0.7149 | likely_pathogenic | 0.526 | ambiguous | -0.735 | Destabilizing | 0.997 | D | 0.656 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.