Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19342 | 58249;58250;58251 | chr2:178594470;178594469;178594468 | chr2:179459197;179459196;179459195 |
N2AB | 17701 | 53326;53327;53328 | chr2:178594470;178594469;178594468 | chr2:179459197;179459196;179459195 |
N2A | 16774 | 50545;50546;50547 | chr2:178594470;178594469;178594468 | chr2:179459197;179459196;179459195 |
N2B | 10277 | 31054;31055;31056 | chr2:178594470;178594469;178594468 | chr2:179459197;179459196;179459195 |
Novex-1 | 10402 | 31429;31430;31431 | chr2:178594470;178594469;178594468 | chr2:179459197;179459196;179459195 |
Novex-2 | 10469 | 31630;31631;31632 | chr2:178594470;178594469;178594468 | chr2:179459197;179459196;179459195 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 0.998 | N | 0.71 | 0.34 | 0.596289430357 | gnomAD-4.0.0 | 2.05311E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69887E-06 | 0 | 0 |
R/K | None | None | 0.973 | N | 0.555 | 0.26 | 0.201204373187 | gnomAD-4.0.0 | 6.84371E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99622E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7878 | likely_pathogenic | 0.8146 | pathogenic | -1.076 | Destabilizing | 0.96 | D | 0.578 | neutral | None | None | None | None | N |
R/C | 0.2924 | likely_benign | 0.3247 | benign | -1.045 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
R/D | 0.8894 | likely_pathogenic | 0.904 | pathogenic | -0.532 | Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
R/E | 0.6495 | likely_pathogenic | 0.6693 | pathogenic | -0.332 | Destabilizing | 0.992 | D | 0.527 | neutral | None | None | None | None | N |
R/F | 0.9248 | likely_pathogenic | 0.9355 | pathogenic | -0.537 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
R/G | 0.5589 | ambiguous | 0.5942 | pathogenic | -1.432 | Destabilizing | 0.989 | D | 0.587 | neutral | N | 0.470124109 | None | None | N |
R/H | 0.3081 | likely_benign | 0.3158 | benign | -1.637 | Destabilizing | 1.0 | D | 0.582 | neutral | None | None | None | None | N |
R/I | 0.7893 | likely_pathogenic | 0.8175 | pathogenic | -0.082 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | N | 0.466236542 | None | None | N |
R/K | 0.1788 | likely_benign | 0.2126 | benign | -0.737 | Destabilizing | 0.973 | D | 0.555 | neutral | N | 0.492753638 | None | None | N |
R/L | 0.542 | ambiguous | 0.5815 | pathogenic | -0.082 | Destabilizing | 0.996 | D | 0.588 | neutral | None | None | None | None | N |
R/M | 0.6626 | likely_pathogenic | 0.7148 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
R/N | 0.7964 | likely_pathogenic | 0.8262 | pathogenic | -0.787 | Destabilizing | 0.992 | D | 0.52 | neutral | None | None | None | None | N |
R/P | 0.7051 | likely_pathogenic | 0.7341 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
R/Q | 0.1923 | likely_benign | 0.1988 | benign | -0.699 | Destabilizing | 0.999 | D | 0.546 | neutral | None | None | None | None | N |
R/S | 0.824 | likely_pathogenic | 0.8399 | pathogenic | -1.455 | Destabilizing | 0.775 | D | 0.467 | neutral | N | 0.508664453 | None | None | N |
R/T | 0.4733 | ambiguous | 0.5114 | ambiguous | -1.037 | Destabilizing | 0.989 | D | 0.565 | neutral | N | 0.393354648 | None | None | N |
R/V | 0.7637 | likely_pathogenic | 0.7932 | pathogenic | -0.396 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/W | 0.5941 | likely_pathogenic | 0.5891 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
R/Y | 0.7831 | likely_pathogenic | 0.8086 | pathogenic | -0.011 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.