Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19349 | 58270;58271;58272 | chr2:178594449;178594448;178594447 | chr2:179459176;179459175;179459174 |
N2AB | 17708 | 53347;53348;53349 | chr2:178594449;178594448;178594447 | chr2:179459176;179459175;179459174 |
N2A | 16781 | 50566;50567;50568 | chr2:178594449;178594448;178594447 | chr2:179459176;179459175;179459174 |
N2B | 10284 | 31075;31076;31077 | chr2:178594449;178594448;178594447 | chr2:179459176;179459175;179459174 |
Novex-1 | 10409 | 31450;31451;31452 | chr2:178594449;178594448;178594447 | chr2:179459176;179459175;179459174 |
Novex-2 | 10476 | 31651;31652;31653 | chr2:178594449;178594448;178594447 | chr2:179459176;179459175;179459174 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.867 | 0.683 | 0.789146157882 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8959 | likely_pathogenic | 0.8723 | pathogenic | -2.292 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
L/C | 0.7597 | likely_pathogenic | 0.7482 | pathogenic | -1.643 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/D | 0.9974 | likely_pathogenic | 0.9968 | pathogenic | -1.913 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/E | 0.9745 | likely_pathogenic | 0.9637 | pathogenic | -1.851 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/F | 0.7499 | likely_pathogenic | 0.6995 | pathogenic | -1.663 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.61250703 | None | None | N |
L/G | 0.9713 | likely_pathogenic | 0.966 | pathogenic | -2.697 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/H | 0.9414 | likely_pathogenic | 0.9256 | pathogenic | -1.832 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/I | 0.3326 | likely_benign | 0.2892 | benign | -1.201 | Destabilizing | 0.999 | D | 0.775 | deleterious | D | 0.614283985 | None | None | N |
L/K | 0.9392 | likely_pathogenic | 0.9183 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/M | 0.352 | ambiguous | 0.3086 | benign | -0.963 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
L/N | 0.9586 | likely_pathogenic | 0.9539 | pathogenic | -1.553 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/P | 0.9876 | likely_pathogenic | 0.9867 | pathogenic | -1.537 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/Q | 0.848 | likely_pathogenic | 0.7936 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/R | 0.9037 | likely_pathogenic | 0.8766 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
L/S | 0.9754 | likely_pathogenic | 0.9664 | pathogenic | -2.271 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.664390471 | None | None | N |
L/T | 0.9103 | likely_pathogenic | 0.8869 | pathogenic | -2.076 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/V | 0.3615 | ambiguous | 0.2997 | benign | -1.537 | Destabilizing | 0.999 | D | 0.788 | deleterious | D | 0.581427327 | None | None | N |
L/W | 0.9529 | likely_pathogenic | 0.9364 | pathogenic | -1.761 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/Y | 0.9549 | likely_pathogenic | 0.9446 | pathogenic | -1.556 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.