Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19351 | 58276;58277;58278 | chr2:178594443;178594442;178594441 | chr2:179459170;179459169;179459168 |
N2AB | 17710 | 53353;53354;53355 | chr2:178594443;178594442;178594441 | chr2:179459170;179459169;179459168 |
N2A | 16783 | 50572;50573;50574 | chr2:178594443;178594442;178594441 | chr2:179459170;179459169;179459168 |
N2B | 10286 | 31081;31082;31083 | chr2:178594443;178594442;178594441 | chr2:179459170;179459169;179459168 |
Novex-1 | 10411 | 31456;31457;31458 | chr2:178594443;178594442;178594441 | chr2:179459170;179459169;179459168 |
Novex-2 | 10478 | 31657;31658;31659 | chr2:178594443;178594442;178594441 | chr2:179459170;179459169;179459168 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.006 | N | 0.096 | 0.161 | 0.255777322467 | gnomAD-4.0.0 | 3.18562E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.87051E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3063 | likely_benign | 0.2478 | benign | -0.546 | Destabilizing | 0.698 | D | 0.412 | neutral | N | 0.46449225 | None | None | N |
E/C | 0.966 | likely_pathogenic | 0.957 | pathogenic | -0.065 | Destabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | N |
E/D | 0.4458 | ambiguous | 0.34 | ambiguous | -0.511 | Destabilizing | 0.006 | N | 0.096 | neutral | N | 0.491576635 | None | None | N |
E/F | 0.9799 | likely_pathogenic | 0.9644 | pathogenic | -0.48 | Destabilizing | 0.978 | D | 0.559 | neutral | None | None | None | None | N |
E/G | 0.5889 | likely_pathogenic | 0.4664 | ambiguous | -0.776 | Destabilizing | 0.822 | D | 0.433 | neutral | N | 0.501869756 | None | None | N |
E/H | 0.9274 | likely_pathogenic | 0.8868 | pathogenic | -0.506 | Destabilizing | 0.998 | D | 0.43 | neutral | None | None | None | None | N |
E/I | 0.7435 | likely_pathogenic | 0.6441 | pathogenic | 0.037 | Stabilizing | 0.915 | D | 0.467 | neutral | None | None | None | None | N |
E/K | 0.6655 | likely_pathogenic | 0.5651 | pathogenic | 0.016 | Stabilizing | 0.822 | D | 0.523 | neutral | N | 0.489081419 | None | None | N |
E/L | 0.8809 | likely_pathogenic | 0.8159 | pathogenic | 0.037 | Stabilizing | 0.754 | D | 0.475 | neutral | None | None | None | None | N |
E/M | 0.8333 | likely_pathogenic | 0.7583 | pathogenic | 0.315 | Stabilizing | 0.994 | D | 0.493 | neutral | None | None | None | None | N |
E/N | 0.7099 | likely_pathogenic | 0.5945 | pathogenic | -0.211 | Destabilizing | 0.915 | D | 0.434 | neutral | None | None | None | None | N |
E/P | 0.6988 | likely_pathogenic | 0.6261 | pathogenic | -0.136 | Destabilizing | 0.978 | D | 0.421 | neutral | None | None | None | None | N |
E/Q | 0.4215 | ambiguous | 0.3435 | ambiguous | -0.178 | Destabilizing | 0.97 | D | 0.489 | neutral | N | 0.474851505 | None | None | N |
E/R | 0.804 | likely_pathogenic | 0.7478 | pathogenic | 0.176 | Stabilizing | 0.978 | D | 0.453 | neutral | None | None | None | None | N |
E/S | 0.5522 | ambiguous | 0.4416 | ambiguous | -0.419 | Destabilizing | 0.86 | D | 0.467 | neutral | None | None | None | None | N |
E/T | 0.5977 | likely_pathogenic | 0.4813 | ambiguous | -0.24 | Destabilizing | 0.86 | D | 0.407 | neutral | None | None | None | None | N |
E/V | 0.5481 | ambiguous | 0.4333 | ambiguous | -0.136 | Destabilizing | 0.032 | N | 0.256 | neutral | N | 0.493222476 | None | None | N |
E/W | 0.9944 | likely_pathogenic | 0.9907 | pathogenic | -0.344 | Destabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | N |
E/Y | 0.9617 | likely_pathogenic | 0.9338 | pathogenic | -0.253 | Destabilizing | 0.993 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.