Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19352 | 58279;58280;58281 | chr2:178594440;178594439;178594438 | chr2:179459167;179459166;179459165 |
N2AB | 17711 | 53356;53357;53358 | chr2:178594440;178594439;178594438 | chr2:179459167;179459166;179459165 |
N2A | 16784 | 50575;50576;50577 | chr2:178594440;178594439;178594438 | chr2:179459167;179459166;179459165 |
N2B | 10287 | 31084;31085;31086 | chr2:178594440;178594439;178594438 | chr2:179459167;179459166;179459165 |
Novex-1 | 10412 | 31459;31460;31461 | chr2:178594440;178594439;178594438 | chr2:179459167;179459166;179459165 |
Novex-2 | 10479 | 31660;31661;31662 | chr2:178594440;178594439;178594438 | chr2:179459167;179459166;179459165 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs995136716 | None | 1.0 | N | 0.793 | 0.428 | 0.367992661779 | gnomAD-4.0.0 | 6.8451E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99692E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5336 | ambiguous | 0.4776 | ambiguous | -0.444 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.487242357 | None | None | N |
G/C | 0.6988 | likely_pathogenic | 0.6593 | pathogenic | -0.863 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.549672651 | None | None | N |
G/D | 0.4951 | ambiguous | 0.4153 | ambiguous | -0.935 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.48030337 | None | None | N |
G/E | 0.6703 | likely_pathogenic | 0.5827 | pathogenic | -1.099 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
G/F | 0.92 | likely_pathogenic | 0.8999 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
G/H | 0.8429 | likely_pathogenic | 0.7992 | pathogenic | -0.719 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
G/I | 0.9324 | likely_pathogenic | 0.9097 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
G/K | 0.8716 | likely_pathogenic | 0.8294 | pathogenic | -0.955 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/L | 0.8685 | likely_pathogenic | 0.8387 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
G/M | 0.8615 | likely_pathogenic | 0.8272 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/N | 0.3741 | ambiguous | 0.3339 | benign | -0.572 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
G/P | 0.9963 | likely_pathogenic | 0.9954 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
G/Q | 0.7852 | likely_pathogenic | 0.7249 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
G/R | 0.8424 | likely_pathogenic | 0.7905 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.516311297 | None | None | N |
G/S | 0.311 | likely_benign | 0.2769 | benign | -0.701 | Destabilizing | 1.0 | D | 0.768 | deleterious | N | 0.490507586 | None | None | N |
G/T | 0.5868 | likely_pathogenic | 0.5379 | ambiguous | -0.807 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
G/V | 0.8697 | likely_pathogenic | 0.8307 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.514932172 | None | None | N |
G/W | 0.8697 | likely_pathogenic | 0.8298 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
G/Y | 0.8385 | likely_pathogenic | 0.8011 | pathogenic | -0.977 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.