Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19353 | 58282;58283;58284 | chr2:178594437;178594436;178594435 | chr2:179459164;179459163;179459162 |
N2AB | 17712 | 53359;53360;53361 | chr2:178594437;178594436;178594435 | chr2:179459164;179459163;179459162 |
N2A | 16785 | 50578;50579;50580 | chr2:178594437;178594436;178594435 | chr2:179459164;179459163;179459162 |
N2B | 10288 | 31087;31088;31089 | chr2:178594437;178594436;178594435 | chr2:179459164;179459163;179459162 |
Novex-1 | 10413 | 31462;31463;31464 | chr2:178594437;178594436;178594435 | chr2:179459164;179459163;179459162 |
Novex-2 | 10480 | 31663;31664;31665 | chr2:178594437;178594436;178594435 | chr2:179459164;179459163;179459162 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.978 | N | 0.49 | 0.311 | 0.229924730088 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2581 | likely_benign | 0.1798 | benign | -0.578 | Destabilizing | 0.9 | D | 0.488 | neutral | N | 0.43293733 | None | None | N |
D/C | 0.7641 | likely_pathogenic | 0.6551 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
D/E | 0.2301 | likely_benign | 0.176 | benign | -0.707 | Destabilizing | 0.948 | D | 0.487 | neutral | N | 0.413351492 | None | None | N |
D/F | 0.7369 | likely_pathogenic | 0.6435 | pathogenic | -0.055 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
D/G | 0.347 | ambiguous | 0.2566 | benign | -0.949 | Destabilizing | 0.978 | D | 0.446 | neutral | N | 0.450832445 | None | None | N |
D/H | 0.5087 | ambiguous | 0.3996 | ambiguous | -0.331 | Destabilizing | 1.0 | D | 0.509 | neutral | N | 0.434497555 | None | None | N |
D/I | 0.6264 | likely_pathogenic | 0.515 | ambiguous | 0.408 | Stabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
D/K | 0.6198 | likely_pathogenic | 0.5044 | ambiguous | -0.396 | Destabilizing | 0.983 | D | 0.538 | neutral | None | None | None | None | N |
D/L | 0.6475 | likely_pathogenic | 0.5328 | ambiguous | 0.408 | Stabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
D/M | 0.7017 | likely_pathogenic | 0.6118 | pathogenic | 0.846 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
D/N | 0.1272 | likely_benign | 0.1069 | benign | -0.941 | Destabilizing | 0.978 | D | 0.49 | neutral | N | 0.454083394 | None | None | N |
D/P | 0.9865 | likely_pathogenic | 0.9795 | pathogenic | 0.105 | Stabilizing | 0.998 | D | 0.54 | neutral | None | None | None | None | N |
D/Q | 0.4597 | ambiguous | 0.358 | ambiguous | -0.765 | Destabilizing | 0.998 | D | 0.537 | neutral | None | None | None | None | N |
D/R | 0.7415 | likely_pathogenic | 0.6227 | pathogenic | -0.183 | Destabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | N |
D/S | 0.1768 | likely_benign | 0.1376 | benign | -1.18 | Destabilizing | 0.487 | N | 0.145 | neutral | None | None | None | None | N |
D/T | 0.4112 | ambiguous | 0.3217 | benign | -0.867 | Destabilizing | 0.967 | D | 0.489 | neutral | None | None | None | None | N |
D/V | 0.4376 | ambiguous | 0.329 | benign | 0.105 | Stabilizing | 0.997 | D | 0.659 | neutral | N | 0.419085386 | None | None | N |
D/W | 0.9637 | likely_pathogenic | 0.9391 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
D/Y | 0.405 | ambiguous | 0.3129 | benign | 0.196 | Stabilizing | 0.999 | D | 0.654 | neutral | N | 0.472013894 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.