Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19357 | 58294;58295;58296 | chr2:178594425;178594424;178594423 | chr2:179459152;179459151;179459150 |
N2AB | 17716 | 53371;53372;53373 | chr2:178594425;178594424;178594423 | chr2:179459152;179459151;179459150 |
N2A | 16789 | 50590;50591;50592 | chr2:178594425;178594424;178594423 | chr2:179459152;179459151;179459150 |
N2B | 10292 | 31099;31100;31101 | chr2:178594425;178594424;178594423 | chr2:179459152;179459151;179459150 |
Novex-1 | 10417 | 31474;31475;31476 | chr2:178594425;178594424;178594423 | chr2:179459152;179459151;179459150 |
Novex-2 | 10484 | 31675;31676;31677 | chr2:178594425;178594424;178594423 | chr2:179459152;179459151;179459150 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs373907843 | -1.517 | 0.995 | N | 0.881 | 0.382 | None | gnomAD-2.1.1 | 1.62E-05 | None | None | None | None | N | None | 2.58565E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs373907843 | -1.517 | 0.995 | N | 0.881 | 0.382 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20662E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs373907843 | -1.517 | 0.995 | N | 0.881 | 0.382 | None | gnomAD-4.0.0 | 8.98118E-06 | None | None | None | None | N | None | 1.18495E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9944 | likely_pathogenic | 0.9943 | pathogenic | -2.749 | Highly Destabilizing | 0.775 | D | 0.869 | deleterious | None | None | None | None | N |
Y/C | 0.8541 | likely_pathogenic | 0.8684 | pathogenic | -1.829 | Destabilizing | 0.995 | D | 0.881 | deleterious | N | 0.474989636 | None | None | N |
Y/D | 0.9977 | likely_pathogenic | 0.9967 | pathogenic | -3.545 | Highly Destabilizing | 0.983 | D | 0.903 | deleterious | N | 0.475496615 | None | None | N |
Y/E | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -3.313 | Highly Destabilizing | 0.987 | D | 0.901 | deleterious | None | None | None | None | N |
Y/F | 0.0801 | likely_benign | 0.0758 | benign | -1.086 | Destabilizing | 0.003 | N | 0.166 | neutral | N | 0.29975384 | None | None | N |
Y/G | 0.9885 | likely_pathogenic | 0.9882 | pathogenic | -3.184 | Highly Destabilizing | 0.961 | D | 0.911 | deleterious | None | None | None | None | N |
Y/H | 0.9804 | likely_pathogenic | 0.9753 | pathogenic | -2.193 | Highly Destabilizing | 0.983 | D | 0.747 | deleterious | N | 0.510958184 | None | None | N |
Y/I | 0.8944 | likely_pathogenic | 0.9158 | pathogenic | -1.299 | Destabilizing | 0.633 | D | 0.847 | deleterious | None | None | None | None | N |
Y/K | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -2.539 | Highly Destabilizing | 0.961 | D | 0.901 | deleterious | None | None | None | None | N |
Y/L | 0.8324 | likely_pathogenic | 0.8957 | pathogenic | -1.299 | Destabilizing | 0.415 | N | 0.809 | deleterious | None | None | None | None | N |
Y/M | 0.935 | likely_pathogenic | 0.9503 | pathogenic | -1.082 | Destabilizing | 0.961 | D | 0.885 | deleterious | None | None | None | None | N |
Y/N | 0.9872 | likely_pathogenic | 0.9849 | pathogenic | -3.542 | Highly Destabilizing | 0.983 | D | 0.892 | deleterious | N | 0.475496615 | None | None | N |
Y/P | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.799 | Destabilizing | 0.987 | D | 0.923 | deleterious | None | None | None | None | N |
Y/Q | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -3.13 | Highly Destabilizing | 0.987 | D | 0.875 | deleterious | None | None | None | None | N |
Y/R | 0.9982 | likely_pathogenic | 0.9979 | pathogenic | -2.578 | Highly Destabilizing | 0.961 | D | 0.888 | deleterious | None | None | None | None | N |
Y/S | 0.9928 | likely_pathogenic | 0.9915 | pathogenic | -3.78 | Highly Destabilizing | 0.949 | D | 0.905 | deleterious | N | 0.521385821 | None | None | N |
Y/T | 0.9952 | likely_pathogenic | 0.9949 | pathogenic | -3.411 | Highly Destabilizing | 0.961 | D | 0.905 | deleterious | None | None | None | None | N |
Y/V | 0.894 | likely_pathogenic | 0.9119 | pathogenic | -1.799 | Destabilizing | 0.633 | D | 0.835 | deleterious | None | None | None | None | N |
Y/W | 0.8479 | likely_pathogenic | 0.8145 | pathogenic | -0.503 | Destabilizing | 0.987 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.