Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19369 | 58330;58331;58332 | chr2:178594389;178594388;178594387 | chr2:179459116;179459115;179459114 |
N2AB | 17728 | 53407;53408;53409 | chr2:178594389;178594388;178594387 | chr2:179459116;179459115;179459114 |
N2A | 16801 | 50626;50627;50628 | chr2:178594389;178594388;178594387 | chr2:179459116;179459115;179459114 |
N2B | 10304 | 31135;31136;31137 | chr2:178594389;178594388;178594387 | chr2:179459116;179459115;179459114 |
Novex-1 | 10429 | 31510;31511;31512 | chr2:178594389;178594388;178594387 | chr2:179459116;179459115;179459114 |
Novex-2 | 10496 | 31711;31712;31713 | chr2:178594389;178594388;178594387 | chr2:179459116;179459115;179459114 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs759447234 | None | 0.999 | N | 0.696 | 0.395 | 0.259761712551 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs759447234 | None | 0.999 | N | 0.696 | 0.395 | 0.259761712551 | gnomAD-4.0.0 | 1.43457E-05 | None | None | None | None | I | None | 0 | 1.70045E-05 | None | 0 | 0 | None | 0 | 0 | 1.53291E-05 | 0 | 6.45557E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8775 | likely_pathogenic | 0.8631 | pathogenic | 0.011 | Stabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
K/C | 0.9549 | likely_pathogenic | 0.9492 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
K/D | 0.9489 | likely_pathogenic | 0.9339 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
K/E | 0.7784 | likely_pathogenic | 0.7176 | pathogenic | 0.127 | Stabilizing | 0.999 | D | 0.696 | prob.neutral | N | 0.443597041 | None | None | I |
K/F | 0.975 | likely_pathogenic | 0.9592 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
K/G | 0.9387 | likely_pathogenic | 0.9271 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
K/H | 0.7867 | likely_pathogenic | 0.7426 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
K/I | 0.7948 | likely_pathogenic | 0.7403 | pathogenic | 0.485 | Stabilizing | 1.0 | D | 0.807 | deleterious | N | 0.473623737 | None | None | I |
K/L | 0.7922 | likely_pathogenic | 0.7523 | pathogenic | 0.485 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
K/M | 0.7189 | likely_pathogenic | 0.6505 | pathogenic | 0.177 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
K/N | 0.8975 | likely_pathogenic | 0.8619 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.77 | deleterious | N | 0.515094567 | None | None | I |
K/P | 0.8607 | likely_pathogenic | 0.8651 | pathogenic | 0.355 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
K/Q | 0.5319 | ambiguous | 0.4881 | ambiguous | 0.001 | Stabilizing | 1.0 | D | 0.761 | deleterious | N | 0.482886148 | None | None | I |
K/R | 0.1722 | likely_benign | 0.1756 | benign | -0.041 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.470495641 | None | None | I |
K/S | 0.923 | likely_pathogenic | 0.9032 | pathogenic | -0.347 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | I |
K/T | 0.7623 | likely_pathogenic | 0.7211 | pathogenic | -0.178 | Destabilizing | 1.0 | D | 0.79 | deleterious | N | 0.519500309 | None | None | I |
K/V | 0.7828 | likely_pathogenic | 0.7454 | pathogenic | 0.355 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
K/W | 0.978 | likely_pathogenic | 0.9655 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
K/Y | 0.9305 | likely_pathogenic | 0.899 | pathogenic | 0.212 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.