Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19370 | 58333;58334;58335 | chr2:178594386;178594385;178594384 | chr2:179459113;179459112;179459111 |
N2AB | 17729 | 53410;53411;53412 | chr2:178594386;178594385;178594384 | chr2:179459113;179459112;179459111 |
N2A | 16802 | 50629;50630;50631 | chr2:178594386;178594385;178594384 | chr2:179459113;179459112;179459111 |
N2B | 10305 | 31138;31139;31140 | chr2:178594386;178594385;178594384 | chr2:179459113;179459112;179459111 |
Novex-1 | 10430 | 31513;31514;31515 | chr2:178594386;178594385;178594384 | chr2:179459113;179459112;179459111 |
Novex-2 | 10497 | 31714;31715;31716 | chr2:178594386;178594385;178594384 | chr2:179459113;179459112;179459111 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 1.0 | N | 0.787 | 0.424 | 0.362758974969 | gnomAD-4.0.0 | 1.37864E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8084E-06 | 0 | 0 |
P/T | rs890232785 | None | 1.0 | N | 0.829 | 0.445 | None | gnomAD-4.0.0 | 6.8932E-07 | None | None | None | None | N | None | 3.02645E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4129 | ambiguous | 0.3511 | ambiguous | -1.495 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.481026342 | None | None | N |
P/C | 0.9583 | likely_pathogenic | 0.9468 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/D | 0.9847 | likely_pathogenic | 0.9805 | pathogenic | -1.528 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
P/E | 0.9624 | likely_pathogenic | 0.9488 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
P/F | 0.9599 | likely_pathogenic | 0.9409 | pathogenic | -1.33 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/G | 0.9171 | likely_pathogenic | 0.9043 | pathogenic | -1.748 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
P/H | 0.8433 | likely_pathogenic | 0.7845 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/I | 0.9509 | likely_pathogenic | 0.9276 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
P/K | 0.969 | likely_pathogenic | 0.9602 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
P/L | 0.8503 | likely_pathogenic | 0.794 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.501359096 | None | None | N |
P/M | 0.9403 | likely_pathogenic | 0.9228 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
P/N | 0.9642 | likely_pathogenic | 0.9469 | pathogenic | -0.872 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
P/Q | 0.8845 | likely_pathogenic | 0.8499 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.523048203 | None | None | N |
P/R | 0.9267 | likely_pathogenic | 0.9007 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.883 | deleterious | N | 0.513982849 | None | None | N |
P/S | 0.7901 | likely_pathogenic | 0.7299 | pathogenic | -1.351 | Destabilizing | 1.0 | D | 0.824 | deleterious | N | 0.49528271 | None | None | N |
P/T | 0.8225 | likely_pathogenic | 0.7645 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.518021774 | None | None | N |
P/V | 0.875 | likely_pathogenic | 0.8294 | pathogenic | -1.073 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
P/W | 0.9802 | likely_pathogenic | 0.9723 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
P/Y | 0.9386 | likely_pathogenic | 0.9107 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.