Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19380 | 58363;58364;58365 | chr2:178594356;178594355;178594354 | chr2:179459083;179459082;179459081 |
N2AB | 17739 | 53440;53441;53442 | chr2:178594356;178594355;178594354 | chr2:179459083;179459082;179459081 |
N2A | 16812 | 50659;50660;50661 | chr2:178594356;178594355;178594354 | chr2:179459083;179459082;179459081 |
N2B | 10315 | 31168;31169;31170 | chr2:178594356;178594355;178594354 | chr2:179459083;179459082;179459081 |
Novex-1 | 10440 | 31543;31544;31545 | chr2:178594356;178594355;178594354 | chr2:179459083;179459082;179459081 |
Novex-2 | 10507 | 31744;31745;31746 | chr2:178594356;178594355;178594354 | chr2:179459083;179459082;179459081 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1245279855 | -0.11 | 0.883 | N | 0.502 | 0.202 | 0.260249123532 | gnomAD-2.1.1 | 4.3E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.83E-05 | None | 0 | 0 | 0 |
K/T | rs1245279855 | -0.11 | 0.883 | N | 0.502 | 0.202 | 0.260249123532 | gnomAD-4.0.0 | 1.64569E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.52064E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7814 | likely_pathogenic | 0.7458 | pathogenic | -0.173 | Destabilizing | 0.74 | D | 0.514 | neutral | None | None | None | None | N |
K/C | 0.8344 | likely_pathogenic | 0.8437 | pathogenic | -0.122 | Destabilizing | 0.996 | D | 0.756 | deleterious | None | None | None | None | N |
K/D | 0.9578 | likely_pathogenic | 0.9438 | pathogenic | -0.089 | Destabilizing | 0.953 | D | 0.531 | neutral | None | None | None | None | N |
K/E | 0.5339 | ambiguous | 0.4865 | ambiguous | -0.056 | Destabilizing | 0.682 | D | 0.515 | neutral | N | 0.514702204 | None | None | N |
K/F | 0.9463 | likely_pathogenic | 0.9334 | pathogenic | -0.214 | Destabilizing | 0.996 | D | 0.699 | prob.delet. | None | None | None | None | N |
K/G | 0.8979 | likely_pathogenic | 0.8714 | pathogenic | -0.454 | Destabilizing | 0.909 | D | 0.427 | neutral | None | None | None | None | N |
K/H | 0.5357 | ambiguous | 0.5251 | ambiguous | -0.926 | Destabilizing | 0.987 | D | 0.506 | neutral | None | None | None | None | N |
K/I | 0.6011 | likely_pathogenic | 0.5535 | ambiguous | 0.51 | Stabilizing | 0.953 | D | 0.76 | deleterious | None | None | None | None | N |
K/L | 0.7038 | likely_pathogenic | 0.6692 | pathogenic | 0.51 | Stabilizing | 0.909 | D | 0.427 | neutral | None | None | None | None | N |
K/M | 0.5219 | ambiguous | 0.4888 | ambiguous | 0.522 | Stabilizing | 0.994 | D | 0.503 | neutral | N | 0.473540696 | None | None | N |
K/N | 0.8911 | likely_pathogenic | 0.859 | pathogenic | 0.09 | Stabilizing | 0.883 | D | 0.568 | neutral | N | 0.503001257 | None | None | N |
K/P | 0.9907 | likely_pathogenic | 0.9887 | pathogenic | 0.313 | Stabilizing | 0.984 | D | 0.516 | neutral | None | None | None | None | N |
K/Q | 0.2438 | likely_benign | 0.2321 | benign | -0.128 | Destabilizing | 0.883 | D | 0.603 | neutral | N | 0.506026793 | None | None | N |
K/R | 0.0861 | likely_benign | 0.0847 | benign | -0.246 | Destabilizing | 0.007 | N | 0.233 | neutral | N | 0.459563784 | None | None | N |
K/S | 0.8568 | likely_pathogenic | 0.8208 | pathogenic | -0.453 | Destabilizing | 0.74 | D | 0.58 | neutral | None | None | None | None | N |
K/T | 0.4828 | ambiguous | 0.4358 | ambiguous | -0.251 | Destabilizing | 0.883 | D | 0.502 | neutral | N | 0.466032278 | None | None | N |
K/V | 0.5428 | ambiguous | 0.5044 | ambiguous | 0.313 | Stabilizing | 0.953 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/W | 0.9244 | likely_pathogenic | 0.9124 | pathogenic | -0.144 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
K/Y | 0.8917 | likely_pathogenic | 0.8762 | pathogenic | 0.189 | Stabilizing | 0.984 | D | 0.669 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.