Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19406 | 58441;58442;58443 | chr2:178594177;178594176;178594175 | chr2:179458904;179458903;179458902 |
N2AB | 17765 | 53518;53519;53520 | chr2:178594177;178594176;178594175 | chr2:179458904;179458903;179458902 |
N2A | 16838 | 50737;50738;50739 | chr2:178594177;178594176;178594175 | chr2:179458904;179458903;179458902 |
N2B | 10341 | 31246;31247;31248 | chr2:178594177;178594176;178594175 | chr2:179458904;179458903;179458902 |
Novex-1 | 10466 | 31621;31622;31623 | chr2:178594177;178594176;178594175 | chr2:179458904;179458903;179458902 |
Novex-2 | 10533 | 31822;31823;31824 | chr2:178594177;178594176;178594175 | chr2:179458904;179458903;179458902 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.982 | N | 0.699 | 0.314 | 0.627153701111 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9262 | likely_pathogenic | 0.9178 | pathogenic | -2.048 | Highly Destabilizing | 0.953 | D | 0.714 | prob.delet. | None | None | None | None | N |
L/C | 0.9127 | likely_pathogenic | 0.9115 | pathogenic | -1.3 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -2.501 | Highly Destabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | N |
L/E | 0.9934 | likely_pathogenic | 0.9924 | pathogenic | -2.226 | Highly Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
L/F | 0.4299 | ambiguous | 0.3975 | ambiguous | -1.293 | Destabilizing | 0.982 | D | 0.699 | prob.neutral | N | 0.487378304 | None | None | N |
L/G | 0.9894 | likely_pathogenic | 0.9869 | pathogenic | -2.571 | Highly Destabilizing | 0.993 | D | 0.848 | deleterious | None | None | None | None | N |
L/H | 0.9842 | likely_pathogenic | 0.9832 | pathogenic | -2.144 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | D | 0.613362505 | None | None | N |
L/I | 0.125 | likely_benign | 0.1216 | benign | -0.506 | Destabilizing | 0.17 | N | 0.375 | neutral | D | 0.532742832 | None | None | N |
L/K | 0.9882 | likely_pathogenic | 0.9868 | pathogenic | -1.462 | Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
L/M | 0.2382 | likely_benign | 0.2298 | benign | -0.585 | Destabilizing | 0.807 | D | 0.575 | neutral | None | None | None | None | N |
L/N | 0.9945 | likely_pathogenic | 0.9942 | pathogenic | -2.019 | Highly Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
L/P | 0.9882 | likely_pathogenic | 0.9853 | pathogenic | -1.007 | Destabilizing | 0.997 | D | 0.828 | deleterious | D | 0.613362505 | None | None | N |
L/Q | 0.9753 | likely_pathogenic | 0.9716 | pathogenic | -1.734 | Destabilizing | 0.993 | D | 0.817 | deleterious | None | None | None | None | N |
L/R | 0.981 | likely_pathogenic | 0.9759 | pathogenic | -1.577 | Destabilizing | 0.991 | D | 0.817 | deleterious | D | 0.613362505 | None | None | N |
L/S | 0.9904 | likely_pathogenic | 0.9889 | pathogenic | -2.602 | Highly Destabilizing | 0.993 | D | 0.828 | deleterious | None | None | None | None | N |
L/T | 0.9655 | likely_pathogenic | 0.9649 | pathogenic | -2.165 | Highly Destabilizing | 0.986 | D | 0.771 | deleterious | None | None | None | None | N |
L/V | 0.1783 | likely_benign | 0.1739 | benign | -1.007 | Destabilizing | 0.17 | N | 0.364 | neutral | D | 0.556633968 | None | None | N |
L/W | 0.9208 | likely_pathogenic | 0.91 | pathogenic | -1.598 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
L/Y | 0.9473 | likely_pathogenic | 0.9414 | pathogenic | -1.286 | Destabilizing | 0.993 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.