Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19421 | 58486;58487;58488 | chr2:178594132;178594131;178594130 | chr2:179458859;179458858;179458857 |
N2AB | 17780 | 53563;53564;53565 | chr2:178594132;178594131;178594130 | chr2:179458859;179458858;179458857 |
N2A | 16853 | 50782;50783;50784 | chr2:178594132;178594131;178594130 | chr2:179458859;179458858;179458857 |
N2B | 10356 | 31291;31292;31293 | chr2:178594132;178594131;178594130 | chr2:179458859;179458858;179458857 |
Novex-1 | 10481 | 31666;31667;31668 | chr2:178594132;178594131;178594130 | chr2:179458859;179458858;179458857 |
Novex-2 | 10548 | 31867;31868;31869 | chr2:178594132;178594131;178594130 | chr2:179458859;179458858;179458857 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.003 | N | 0.345 | 0.254 | 0.250579442822 | gnomAD-4.0.0 | 3.18394E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56576E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.3985 | ambiguous | 0.2993 | benign | -2.298 | Highly Destabilizing | 0.055 | N | 0.491 | neutral | None | None | None | None | N |
F/C | 0.2193 | likely_benign | 0.1674 | benign | -1.06 | Destabilizing | 0.822 | D | 0.554 | neutral | N | 0.469204921 | None | None | N |
F/D | 0.7528 | likely_pathogenic | 0.6899 | pathogenic | -1.128 | Destabilizing | 0.22 | N | 0.587 | neutral | None | None | None | None | N |
F/E | 0.5775 | likely_pathogenic | 0.4963 | ambiguous | -1.059 | Destabilizing | 0.22 | N | 0.569 | neutral | None | None | None | None | N |
F/G | 0.6301 | likely_pathogenic | 0.5435 | ambiguous | -2.622 | Highly Destabilizing | 0.124 | N | 0.542 | neutral | None | None | None | None | N |
F/H | 0.2682 | likely_benign | 0.2302 | benign | -0.925 | Destabilizing | 0.667 | D | 0.532 | neutral | None | None | None | None | N |
F/I | 0.1601 | likely_benign | 0.1263 | benign | -1.327 | Destabilizing | 0.042 | N | 0.404 | neutral | N | 0.464580028 | None | None | N |
F/K | 0.3357 | likely_benign | 0.2931 | benign | -1.032 | Destabilizing | 0.124 | N | 0.549 | neutral | None | None | None | None | N |
F/L | 0.5754 | likely_pathogenic | 0.4626 | ambiguous | -1.327 | Destabilizing | None | N | 0.179 | neutral | N | 0.391119632 | None | None | N |
F/M | 0.3062 | likely_benign | 0.2488 | benign | -0.969 | Destabilizing | 0.497 | N | 0.499 | neutral | None | None | None | None | N |
F/N | 0.4307 | ambiguous | 0.365 | ambiguous | -0.981 | Destabilizing | 0.124 | N | 0.601 | neutral | None | None | None | None | N |
F/P | 0.9933 | likely_pathogenic | 0.9914 | pathogenic | -1.645 | Destabilizing | 0.667 | D | 0.61 | neutral | None | None | None | None | N |
F/Q | 0.3356 | likely_benign | 0.2883 | benign | -1.149 | Destabilizing | 0.497 | N | 0.601 | neutral | None | None | None | None | N |
F/R | 0.2797 | likely_benign | 0.2414 | benign | -0.322 | Destabilizing | 0.497 | N | 0.613 | neutral | None | None | None | None | N |
F/S | 0.2724 | likely_benign | 0.1958 | benign | -1.796 | Destabilizing | 0.003 | N | 0.345 | neutral | N | 0.426504429 | None | None | N |
F/T | 0.2693 | likely_benign | 0.2105 | benign | -1.638 | Destabilizing | 0.002 | N | 0.329 | neutral | None | None | None | None | N |
F/V | 0.161 | likely_benign | 0.1267 | benign | -1.645 | Destabilizing | 0.042 | N | 0.449 | neutral | N | 0.483165789 | None | None | N |
F/W | 0.3431 | ambiguous | 0.3002 | benign | -0.518 | Destabilizing | 0.958 | D | 0.516 | neutral | None | None | None | None | N |
F/Y | 0.1071 | likely_benign | 0.1014 | benign | -0.677 | Destabilizing | 0.301 | N | 0.434 | neutral | N | 0.41555393 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.