Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19426 | 58501;58502;58503 | chr2:178594117;178594116;178594115 | chr2:179458844;179458843;179458842 |
N2AB | 17785 | 53578;53579;53580 | chr2:178594117;178594116;178594115 | chr2:179458844;179458843;179458842 |
N2A | 16858 | 50797;50798;50799 | chr2:178594117;178594116;178594115 | chr2:179458844;179458843;179458842 |
N2B | 10361 | 31306;31307;31308 | chr2:178594117;178594116;178594115 | chr2:179458844;179458843;179458842 |
Novex-1 | 10486 | 31681;31682;31683 | chr2:178594117;178594116;178594115 | chr2:179458844;179458843;179458842 |
Novex-2 | 10553 | 31882;31883;31884 | chr2:178594117;178594116;178594115 | chr2:179458844;179458843;179458842 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs1408473678 | None | 0.794 | D | 0.359 | 0.276 | 0.406531046227 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/H | rs1408473678 | None | 0.794 | D | 0.359 | 0.276 | 0.406531046227 | gnomAD-4.0.0 | 6.57549E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0712 | likely_benign | 0.0648 | benign | -0.375 | Destabilizing | 0.101 | N | 0.385 | neutral | N | 0.492058284 | None | None | N |
D/C | 0.3404 | ambiguous | 0.2808 | benign | -0.194 | Destabilizing | 0.983 | D | 0.357 | neutral | None | None | None | None | N |
D/E | 0.0815 | likely_benign | 0.0739 | benign | -0.263 | Destabilizing | None | N | 0.186 | neutral | N | 0.389931206 | None | None | N |
D/F | 0.3333 | likely_benign | 0.2657 | benign | -0.025 | Destabilizing | 0.836 | D | 0.367 | neutral | None | None | None | None | N |
D/G | 0.1074 | likely_benign | 0.092 | benign | -0.608 | Destabilizing | 0.351 | N | 0.341 | neutral | D | 0.528288443 | None | None | N |
D/H | 0.1445 | likely_benign | 0.1217 | benign | 0.241 | Stabilizing | 0.794 | D | 0.359 | neutral | D | 0.528115084 | None | None | N |
D/I | 0.138 | likely_benign | 0.1133 | benign | 0.207 | Stabilizing | 0.264 | N | 0.375 | neutral | None | None | None | None | N |
D/K | 0.1205 | likely_benign | 0.1022 | benign | 0.26 | Stabilizing | 0.129 | N | 0.347 | neutral | None | None | None | None | N |
D/L | 0.1485 | likely_benign | 0.1288 | benign | 0.207 | Stabilizing | 0.129 | N | 0.383 | neutral | None | None | None | None | N |
D/M | 0.2922 | likely_benign | 0.2405 | benign | 0.228 | Stabilizing | 0.836 | D | 0.361 | neutral | None | None | None | None | N |
D/N | 0.0708 | likely_benign | 0.066 | benign | -0.265 | Destabilizing | 0.351 | N | 0.307 | neutral | N | 0.492751717 | None | None | N |
D/P | 0.1968 | likely_benign | 0.1622 | benign | 0.035 | Stabilizing | 0.593 | D | 0.372 | neutral | None | None | None | None | N |
D/Q | 0.1491 | likely_benign | 0.1244 | benign | -0.188 | Destabilizing | 0.264 | N | 0.275 | neutral | None | None | None | None | N |
D/R | 0.1589 | likely_benign | 0.1261 | benign | 0.549 | Stabilizing | 0.418 | N | 0.368 | neutral | None | None | None | None | N |
D/S | 0.0798 | likely_benign | 0.0717 | benign | -0.366 | Destabilizing | 0.129 | N | 0.308 | neutral | None | None | None | None | N |
D/T | 0.1121 | likely_benign | 0.0973 | benign | -0.169 | Destabilizing | 0.01 | N | 0.191 | neutral | None | None | None | None | N |
D/V | 0.0861 | likely_benign | 0.0734 | benign | 0.035 | Stabilizing | 0.002 | N | 0.281 | neutral | N | 0.459351219 | None | None | N |
D/W | 0.7044 | likely_pathogenic | 0.6179 | pathogenic | 0.201 | Stabilizing | 0.983 | D | 0.393 | neutral | None | None | None | None | N |
D/Y | 0.1327 | likely_benign | 0.1178 | benign | 0.239 | Stabilizing | 0.921 | D | 0.368 | neutral | N | 0.497381938 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.