Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19427 | 58504;58505;58506 | chr2:178594114;178594113;178594112 | chr2:179458841;179458840;179458839 |
N2AB | 17786 | 53581;53582;53583 | chr2:178594114;178594113;178594112 | chr2:179458841;179458840;179458839 |
N2A | 16859 | 50800;50801;50802 | chr2:178594114;178594113;178594112 | chr2:179458841;179458840;179458839 |
N2B | 10362 | 31309;31310;31311 | chr2:178594114;178594113;178594112 | chr2:179458841;179458840;179458839 |
Novex-1 | 10487 | 31684;31685;31686 | chr2:178594114;178594113;178594112 | chr2:179458841;179458840;179458839 |
Novex-2 | 10554 | 31885;31886;31887 | chr2:178594114;178594113;178594112 | chr2:179458841;179458840;179458839 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.627 | N | 0.515 | 0.122 | 0.378847511475 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4782 | ambiguous | 0.4116 | ambiguous | -1.568 | Destabilizing | 0.165 | N | 0.443 | neutral | N | 0.516802866 | None | None | N |
V/C | 0.7717 | likely_pathogenic | 0.7328 | pathogenic | -0.972 | Destabilizing | 0.981 | D | 0.529 | neutral | None | None | None | None | N |
V/D | 0.8039 | likely_pathogenic | 0.7277 | pathogenic | -1.576 | Destabilizing | 0.818 | D | 0.651 | neutral | None | None | None | None | N |
V/E | 0.7378 | likely_pathogenic | 0.6678 | pathogenic | -1.419 | Destabilizing | 0.773 | D | 0.555 | neutral | N | 0.500130643 | None | None | N |
V/F | 0.2376 | likely_benign | 0.2164 | benign | -0.963 | Destabilizing | 0.69 | D | 0.523 | neutral | None | None | None | None | N |
V/G | 0.5944 | likely_pathogenic | 0.5034 | ambiguous | -2.022 | Highly Destabilizing | 0.773 | D | 0.581 | neutral | N | 0.518070314 | None | None | N |
V/H | 0.882 | likely_pathogenic | 0.8467 | pathogenic | -1.582 | Destabilizing | 0.981 | D | 0.647 | neutral | None | None | None | None | N |
V/I | 0.063 | likely_benign | 0.0671 | benign | -0.347 | Destabilizing | 0.002 | N | 0.246 | neutral | None | None | None | None | N |
V/K | 0.8349 | likely_pathogenic | 0.7781 | pathogenic | -1.228 | Destabilizing | 0.818 | D | 0.536 | neutral | None | None | None | None | N |
V/L | 0.1451 | likely_benign | 0.1494 | benign | -0.347 | Destabilizing | None | N | 0.179 | neutral | N | 0.404356367 | None | None | N |
V/M | 0.192 | likely_benign | 0.1767 | benign | -0.323 | Destabilizing | 0.627 | D | 0.515 | neutral | N | 0.509510681 | None | None | N |
V/N | 0.708 | likely_pathogenic | 0.6495 | pathogenic | -1.364 | Destabilizing | 0.932 | D | 0.655 | neutral | None | None | None | None | N |
V/P | 0.8448 | likely_pathogenic | 0.826 | pathogenic | -0.723 | Destabilizing | 0.932 | D | 0.603 | neutral | None | None | None | None | N |
V/Q | 0.789 | likely_pathogenic | 0.73 | pathogenic | -1.285 | Destabilizing | 0.932 | D | 0.605 | neutral | None | None | None | None | N |
V/R | 0.8091 | likely_pathogenic | 0.75 | pathogenic | -1.016 | Destabilizing | 0.818 | D | 0.657 | neutral | None | None | None | None | N |
V/S | 0.6521 | likely_pathogenic | 0.5747 | pathogenic | -1.971 | Destabilizing | 0.818 | D | 0.527 | neutral | None | None | None | None | N |
V/T | 0.4975 | ambiguous | 0.4302 | ambiguous | -1.67 | Destabilizing | 0.388 | N | 0.448 | neutral | None | None | None | None | N |
V/W | 0.9002 | likely_pathogenic | 0.8729 | pathogenic | -1.336 | Destabilizing | 0.981 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/Y | 0.7234 | likely_pathogenic | 0.6822 | pathogenic | -0.928 | Destabilizing | 0.818 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.