Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19438 | 58537;58538;58539 | chr2:178594081;178594080;178594079 | chr2:179458808;179458807;179458806 |
N2AB | 17797 | 53614;53615;53616 | chr2:178594081;178594080;178594079 | chr2:179458808;179458807;179458806 |
N2A | 16870 | 50833;50834;50835 | chr2:178594081;178594080;178594079 | chr2:179458808;179458807;179458806 |
N2B | 10373 | 31342;31343;31344 | chr2:178594081;178594080;178594079 | chr2:179458808;179458807;179458806 |
Novex-1 | 10498 | 31717;31718;31719 | chr2:178594081;178594080;178594079 | chr2:179458808;179458807;179458806 |
Novex-2 | 10565 | 31918;31919;31920 | chr2:178594081;178594080;178594079 | chr2:179458808;179458807;179458806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs182907667 | None | 0.971 | N | 0.557 | 0.387 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94024E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs182907667 | None | 0.971 | N | 0.557 | 0.387 | None | gnomAD-4.0.0 | 6.57212E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94477E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1426 | likely_benign | 0.1463 | benign | -0.449 | Destabilizing | 0.489 | N | 0.387 | neutral | N | 0.517186015 | None | None | N |
T/C | 0.6381 | likely_pathogenic | 0.6504 | pathogenic | -0.264 | Destabilizing | 0.998 | D | 0.58 | neutral | None | None | None | None | N |
T/D | 0.423 | ambiguous | 0.4709 | ambiguous | 0.217 | Stabilizing | 0.956 | D | 0.487 | neutral | None | None | None | None | N |
T/E | 0.4583 | ambiguous | 0.5109 | ambiguous | 0.166 | Stabilizing | 0.956 | D | 0.496 | neutral | None | None | None | None | N |
T/F | 0.3741 | ambiguous | 0.4026 | ambiguous | -0.824 | Destabilizing | 0.978 | D | 0.628 | neutral | None | None | None | None | N |
T/G | 0.2135 | likely_benign | 0.2182 | benign | -0.622 | Destabilizing | 0.754 | D | 0.476 | neutral | None | None | None | None | N |
T/H | 0.4259 | ambiguous | 0.4451 | ambiguous | -0.869 | Destabilizing | 0.994 | D | 0.628 | neutral | None | None | None | None | N |
T/I | 0.3442 | ambiguous | 0.3868 | ambiguous | -0.107 | Destabilizing | 0.971 | D | 0.557 | neutral | N | 0.491443682 | None | None | N |
T/K | 0.3294 | likely_benign | 0.3972 | ambiguous | -0.397 | Destabilizing | 0.89 | D | 0.49 | neutral | N | 0.519935531 | None | None | N |
T/L | 0.1446 | likely_benign | 0.1571 | benign | -0.107 | Destabilizing | 0.86 | D | 0.449 | neutral | None | None | None | None | N |
T/M | 0.1408 | likely_benign | 0.1479 | benign | 0.028 | Stabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | N |
T/N | 0.1518 | likely_benign | 0.1678 | benign | -0.228 | Destabilizing | 0.915 | D | 0.45 | neutral | None | None | None | None | N |
T/P | 0.438 | ambiguous | 0.5349 | ambiguous | -0.19 | Destabilizing | 0.971 | D | 0.554 | neutral | N | 0.505433334 | None | None | N |
T/Q | 0.3987 | ambiguous | 0.4288 | ambiguous | -0.408 | Destabilizing | 0.956 | D | 0.558 | neutral | None | None | None | None | N |
T/R | 0.3554 | ambiguous | 0.4114 | ambiguous | -0.133 | Destabilizing | 0.942 | D | 0.553 | neutral | N | 0.492556091 | None | None | N |
T/S | 0.1109 | likely_benign | 0.1121 | benign | -0.466 | Destabilizing | 0.058 | N | 0.199 | neutral | N | 0.498541539 | None | None | N |
T/V | 0.2583 | likely_benign | 0.2807 | benign | -0.19 | Destabilizing | 0.86 | D | 0.389 | neutral | None | None | None | None | N |
T/W | 0.8022 | likely_pathogenic | 0.8229 | pathogenic | -0.823 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
T/Y | 0.4515 | ambiguous | 0.4887 | ambiguous | -0.548 | Destabilizing | 0.993 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.