Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19442 | 58549;58550;58551 | chr2:178594069;178594068;178594067 | chr2:179458796;179458795;179458794 |
N2AB | 17801 | 53626;53627;53628 | chr2:178594069;178594068;178594067 | chr2:179458796;179458795;179458794 |
N2A | 16874 | 50845;50846;50847 | chr2:178594069;178594068;178594067 | chr2:179458796;179458795;179458794 |
N2B | 10377 | 31354;31355;31356 | chr2:178594069;178594068;178594067 | chr2:179458796;179458795;179458794 |
Novex-1 | 10502 | 31729;31730;31731 | chr2:178594069;178594068;178594067 | chr2:179458796;179458795;179458794 |
Novex-2 | 10569 | 31930;31931;31932 | chr2:178594069;178594068;178594067 | chr2:179458796;179458795;179458794 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs755527935 | -1.178 | 0.916 | N | 0.831 | 0.324 | 0.422160833541 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/P | rs755527935 | -1.178 | 0.916 | N | 0.831 | 0.324 | 0.422160833541 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
L/R | None | None | 0.781 | N | 0.829 | 0.301 | 0.36036328697 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85909E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6116 | likely_pathogenic | 0.6024 | pathogenic | -2.287 | Highly Destabilizing | 0.399 | N | 0.66 | neutral | None | None | None | None | N |
L/C | 0.7025 | likely_pathogenic | 0.7132 | pathogenic | -1.711 | Destabilizing | 0.982 | D | 0.761 | deleterious | None | None | None | None | N |
L/D | 0.9937 | likely_pathogenic | 0.9946 | pathogenic | -2.471 | Highly Destabilizing | 0.826 | D | 0.833 | deleterious | None | None | None | None | N |
L/E | 0.973 | likely_pathogenic | 0.9786 | pathogenic | -2.236 | Highly Destabilizing | 0.826 | D | 0.833 | deleterious | None | None | None | None | N |
L/F | 0.3027 | likely_benign | 0.3363 | benign | -1.416 | Destabilizing | 0.004 | N | 0.502 | neutral | N | 0.508213375 | None | None | N |
L/G | 0.9341 | likely_pathogenic | 0.9336 | pathogenic | -2.853 | Highly Destabilizing | 0.826 | D | 0.813 | deleterious | None | None | None | None | N |
L/H | 0.9114 | likely_pathogenic | 0.9232 | pathogenic | -2.426 | Highly Destabilizing | 0.976 | D | 0.829 | deleterious | N | 0.473370083 | None | None | N |
L/I | 0.1497 | likely_benign | 0.1429 | benign | -0.652 | Destabilizing | 0.004 | N | 0.463 | neutral | N | 0.501095402 | None | None | N |
L/K | 0.9707 | likely_pathogenic | 0.9758 | pathogenic | -1.552 | Destabilizing | 0.826 | D | 0.813 | deleterious | None | None | None | None | N |
L/M | 0.1319 | likely_benign | 0.1476 | benign | -0.688 | Destabilizing | 0.7 | D | 0.769 | deleterious | None | None | None | None | N |
L/N | 0.9594 | likely_pathogenic | 0.96 | pathogenic | -1.908 | Destabilizing | 0.935 | D | 0.833 | deleterious | None | None | None | None | N |
L/P | 0.9836 | likely_pathogenic | 0.9855 | pathogenic | -1.177 | Destabilizing | 0.916 | D | 0.831 | deleterious | N | 0.455047004 | None | None | N |
L/Q | 0.8986 | likely_pathogenic | 0.9179 | pathogenic | -1.737 | Destabilizing | 0.982 | D | 0.825 | deleterious | None | None | None | None | N |
L/R | 0.9521 | likely_pathogenic | 0.959 | pathogenic | -1.419 | Destabilizing | 0.781 | D | 0.829 | deleterious | N | 0.500922043 | None | None | N |
L/S | 0.8306 | likely_pathogenic | 0.8216 | pathogenic | -2.646 | Highly Destabilizing | 0.826 | D | 0.799 | deleterious | None | None | None | None | N |
L/T | 0.5475 | ambiguous | 0.5058 | ambiguous | -2.251 | Highly Destabilizing | 0.7 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/V | 0.1189 | likely_benign | 0.1142 | benign | -1.177 | Destabilizing | 0.034 | N | 0.648 | neutral | N | 0.464499883 | None | None | N |
L/W | 0.8446 | likely_pathogenic | 0.8761 | pathogenic | -1.811 | Destabilizing | 0.982 | D | 0.837 | deleterious | None | None | None | None | N |
L/Y | 0.8695 | likely_pathogenic | 0.8925 | pathogenic | -1.482 | Destabilizing | 0.539 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.