Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19444 | 58555;58556;58557 | chr2:178594063;178594062;178594061 | chr2:179458790;179458789;179458788 |
N2AB | 17803 | 53632;53633;53634 | chr2:178594063;178594062;178594061 | chr2:179458790;179458789;179458788 |
N2A | 16876 | 50851;50852;50853 | chr2:178594063;178594062;178594061 | chr2:179458790;179458789;179458788 |
N2B | 10379 | 31360;31361;31362 | chr2:178594063;178594062;178594061 | chr2:179458790;179458789;179458788 |
Novex-1 | 10504 | 31735;31736;31737 | chr2:178594063;178594062;178594061 | chr2:179458790;179458789;179458788 |
Novex-2 | 10571 | 31936;31937;31938 | chr2:178594063;178594062;178594061 | chr2:179458790;179458789;179458788 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1239800877 | None | 1.0 | D | 0.893 | 0.711 | 0.742624401447 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/S | rs1239800877 | None | 1.0 | D | 0.893 | 0.711 | 0.742624401447 | gnomAD-4.0.0 | 6.57618E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47085E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8685 | likely_pathogenic | 0.8439 | pathogenic | -2.407 | Highly Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
L/C | 0.8379 | likely_pathogenic | 0.8318 | pathogenic | -1.746 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/D | 0.9981 | likely_pathogenic | 0.9977 | pathogenic | -3.008 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/E | 0.9862 | likely_pathogenic | 0.9837 | pathogenic | -2.708 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/F | 0.2061 | likely_benign | 0.2176 | benign | -1.459 | Destabilizing | 0.64 | D | 0.575 | neutral | N | 0.511000558 | None | None | N |
L/G | 0.9764 | likely_pathogenic | 0.9725 | pathogenic | -2.996 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/H | 0.9476 | likely_pathogenic | 0.9412 | pathogenic | -2.576 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/I | 0.1537 | likely_benign | 0.1508 | benign | -0.659 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | N | 0.508176174 | None | None | N |
L/K | 0.9717 | likely_pathogenic | 0.9648 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/M | 0.2108 | likely_benign | 0.2145 | benign | -0.763 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/N | 0.9898 | likely_pathogenic | 0.9883 | pathogenic | -2.459 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/P | 0.9866 | likely_pathogenic | 0.9872 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/Q | 0.9339 | likely_pathogenic | 0.9224 | pathogenic | -2.166 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/R | 0.9457 | likely_pathogenic | 0.9312 | pathogenic | -1.883 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
L/S | 0.9721 | likely_pathogenic | 0.9655 | pathogenic | -3.09 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.548249479 | None | None | N |
L/T | 0.9118 | likely_pathogenic | 0.9009 | pathogenic | -2.617 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/V | 0.1768 | likely_benign | 0.1663 | benign | -1.229 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | N | 0.517014492 | None | None | N |
L/W | 0.6649 | likely_pathogenic | 0.6654 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/Y | 0.7788 | likely_pathogenic | 0.7894 | pathogenic | -1.53 | Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.