Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19456 | 58591;58592;58593 | chr2:178594027;178594026;178594025 | chr2:179458754;179458753;179458752 |
N2AB | 17815 | 53668;53669;53670 | chr2:178594027;178594026;178594025 | chr2:179458754;179458753;179458752 |
N2A | 16888 | 50887;50888;50889 | chr2:178594027;178594026;178594025 | chr2:179458754;179458753;179458752 |
N2B | 10391 | 31396;31397;31398 | chr2:178594027;178594026;178594025 | chr2:179458754;179458753;179458752 |
Novex-1 | 10516 | 31771;31772;31773 | chr2:178594027;178594026;178594025 | chr2:179458754;179458753;179458752 |
Novex-2 | 10583 | 31972;31973;31974 | chr2:178594027;178594026;178594025 | chr2:179458754;179458753;179458752 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.002 | N | 0.173 | 0.091 | 0.232513804876 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3855 | ambiguous | 0.3745 | ambiguous | -0.745 | Destabilizing | 0.4 | N | 0.433 | neutral | None | None | None | None | N |
K/C | 0.6357 | likely_pathogenic | 0.6486 | pathogenic | -0.643 | Destabilizing | 0.005 | N | 0.379 | neutral | None | None | None | None | N |
K/D | 0.5307 | ambiguous | 0.4935 | ambiguous | -0.278 | Destabilizing | 0.85 | D | 0.557 | neutral | None | None | None | None | N |
K/E | 0.2068 | likely_benign | 0.1859 | benign | -0.141 | Destabilizing | 0.379 | N | 0.424 | neutral | N | 0.501755202 | None | None | N |
K/F | 0.6746 | likely_pathogenic | 0.6677 | pathogenic | -0.334 | Destabilizing | 0.85 | D | 0.571 | neutral | None | None | None | None | N |
K/G | 0.5714 | likely_pathogenic | 0.5569 | ambiguous | -1.142 | Destabilizing | 0.617 | D | 0.521 | neutral | None | None | None | None | N |
K/H | 0.282 | likely_benign | 0.2847 | benign | -1.515 | Destabilizing | 0.92 | D | 0.549 | neutral | None | None | None | None | N |
K/I | 0.2221 | likely_benign | 0.2179 | benign | 0.301 | Stabilizing | 0.379 | N | 0.557 | neutral | D | 0.524786778 | None | None | N |
K/L | 0.2688 | likely_benign | 0.271 | benign | 0.301 | Stabilizing | 0.005 | N | 0.311 | neutral | None | None | None | None | N |
K/M | 0.1806 | likely_benign | 0.1799 | benign | 0.222 | Stabilizing | 0.85 | D | 0.553 | neutral | None | None | None | None | N |
K/N | 0.3186 | likely_benign | 0.2947 | benign | -0.653 | Destabilizing | 0.549 | D | 0.476 | neutral | D | 0.524786778 | None | None | N |
K/P | 0.7309 | likely_pathogenic | 0.7337 | pathogenic | -0.018 | Destabilizing | 0.92 | D | 0.566 | neutral | None | None | None | None | N |
K/Q | 0.1486 | likely_benign | 0.1475 | benign | -0.665 | Destabilizing | 0.81 | D | 0.501 | neutral | N | 0.4967921 | None | None | N |
K/R | 0.0797 | likely_benign | 0.081 | benign | -0.787 | Destabilizing | 0.002 | N | 0.173 | neutral | N | 0.481246644 | None | None | N |
K/S | 0.4034 | ambiguous | 0.3783 | ambiguous | -1.307 | Destabilizing | 0.617 | D | 0.417 | neutral | None | None | None | None | N |
K/T | 0.1375 | likely_benign | 0.1323 | benign | -0.951 | Destabilizing | 0.549 | D | 0.493 | neutral | N | 0.495618664 | None | None | N |
K/V | 0.2342 | likely_benign | 0.2395 | benign | -0.018 | Destabilizing | 0.447 | N | 0.523 | neutral | None | None | None | None | N |
K/W | 0.6832 | likely_pathogenic | 0.6561 | pathogenic | -0.216 | Destabilizing | 0.992 | D | 0.558 | neutral | None | None | None | None | N |
K/Y | 0.5136 | ambiguous | 0.5113 | ambiguous | 0.063 | Stabilizing | 0.972 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.