Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19468 | 58627;58628;58629 | chr2:178593991;178593990;178593989 | chr2:179458718;179458717;179458716 |
N2AB | 17827 | 53704;53705;53706 | chr2:178593991;178593990;178593989 | chr2:179458718;179458717;179458716 |
N2A | 16900 | 50923;50924;50925 | chr2:178593991;178593990;178593989 | chr2:179458718;179458717;179458716 |
N2B | 10403 | 31432;31433;31434 | chr2:178593991;178593990;178593989 | chr2:179458718;179458717;179458716 |
Novex-1 | 10528 | 31807;31808;31809 | chr2:178593991;178593990;178593989 | chr2:179458718;179458717;179458716 |
Novex-2 | 10595 | 32008;32009;32010 | chr2:178593991;178593990;178593989 | chr2:179458718;179458717;179458716 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs2050849448 | None | 0.217 | N | 0.485 | 0.279 | 0.431379191433 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43386E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5845 | likely_pathogenic | 0.5222 | ambiguous | -0.013 | Destabilizing | 0.992 | D | 0.612 | neutral | None | None | None | None | I |
R/C | 0.223 | likely_benign | 0.1815 | benign | -0.306 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
R/D | 0.8914 | likely_pathogenic | 0.8571 | pathogenic | -0.234 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | I |
R/E | 0.6023 | likely_pathogenic | 0.4993 | ambiguous | -0.189 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
R/F | 0.7705 | likely_pathogenic | 0.7077 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
R/G | 0.58 | likely_pathogenic | 0.4793 | ambiguous | -0.164 | Destabilizing | 0.217 | N | 0.485 | neutral | N | 0.493454691 | None | None | I |
R/H | 0.2204 | likely_benign | 0.1791 | benign | -0.597 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | I |
R/I | 0.4123 | ambiguous | 0.3436 | ambiguous | 0.341 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
R/K | 0.1792 | likely_benign | 0.1596 | benign | -0.19 | Destabilizing | 0.987 | D | 0.549 | neutral | N | 0.489055264 | None | None | I |
R/L | 0.4471 | ambiguous | 0.3715 | ambiguous | 0.341 | Stabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | I |
R/M | 0.4535 | ambiguous | 0.3666 | ambiguous | -0.075 | Destabilizing | 1.0 | D | 0.611 | neutral | N | 0.50045613 | None | None | I |
R/N | 0.8141 | likely_pathogenic | 0.7742 | pathogenic | -0.09 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
R/P | 0.9783 | likely_pathogenic | 0.9649 | pathogenic | 0.242 | Stabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
R/Q | 0.1396 | likely_benign | 0.1128 | benign | -0.151 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
R/S | 0.7291 | likely_pathogenic | 0.6521 | pathogenic | -0.339 | Destabilizing | 0.989 | D | 0.629 | neutral | N | 0.520300891 | None | None | I |
R/T | 0.4505 | ambiguous | 0.3671 | ambiguous | -0.18 | Destabilizing | 0.998 | D | 0.605 | neutral | N | 0.49136485 | None | None | I |
R/V | 0.4628 | ambiguous | 0.4028 | ambiguous | 0.242 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
R/W | 0.3879 | ambiguous | 0.2904 | benign | -0.456 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.512319414 | None | None | I |
R/Y | 0.6219 | likely_pathogenic | 0.5418 | ambiguous | -0.046 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.