Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19471 | 58636;58637;58638 | chr2:178593982;178593981;178593980 | chr2:179458709;179458708;179458707 |
N2AB | 17830 | 53713;53714;53715 | chr2:178593982;178593981;178593980 | chr2:179458709;179458708;179458707 |
N2A | 16903 | 50932;50933;50934 | chr2:178593982;178593981;178593980 | chr2:179458709;179458708;179458707 |
N2B | 10406 | 31441;31442;31443 | chr2:178593982;178593981;178593980 | chr2:179458709;179458708;179458707 |
Novex-1 | 10531 | 31816;31817;31818 | chr2:178593982;178593981;178593980 | chr2:179458709;179458708;179458707 |
Novex-2 | 10598 | 32017;32018;32019 | chr2:178593982;178593981;178593980 | chr2:179458709;179458708;179458707 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | None | N | 0.104 | 0.092 | 0.168933306366 | gnomAD-4.0.0 | 6.8434E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99559E-07 | 0 | 0 |
F/L | rs867902753 | None | None | N | 0.118 | 0.092 | 0.556540827966 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/L | rs867902753 | None | None | N | 0.118 | 0.092 | 0.556540827966 | gnomAD-4.0.0 | 6.57592E-06 | None | None | None | None | N | None | 2.41418E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2971 | likely_benign | 0.3357 | benign | -1.135 | Destabilizing | None | N | 0.211 | neutral | None | None | None | None | N |
F/C | 0.2014 | likely_benign | 0.2034 | benign | -0.32 | Destabilizing | 0.196 | N | 0.551 | neutral | D | 0.523687912 | None | None | N |
F/D | 0.4893 | ambiguous | 0.4882 | ambiguous | 0.609 | Stabilizing | 0.044 | N | 0.545 | neutral | None | None | None | None | N |
F/E | 0.5281 | ambiguous | 0.5231 | ambiguous | 0.606 | Stabilizing | 0.009 | N | 0.501 | neutral | None | None | None | None | N |
F/G | 0.5729 | likely_pathogenic | 0.5949 | pathogenic | -1.364 | Destabilizing | 0.009 | N | 0.459 | neutral | None | None | None | None | N |
F/H | 0.3442 | ambiguous | 0.3611 | ambiguous | 0.088 | Stabilizing | 0.138 | N | 0.505 | neutral | None | None | None | None | N |
F/I | 0.0797 | likely_benign | 0.0908 | benign | -0.527 | Destabilizing | None | N | 0.104 | neutral | N | 0.414712221 | None | None | N |
F/K | 0.6207 | likely_pathogenic | 0.6171 | pathogenic | -0.206 | Destabilizing | 0.009 | N | 0.506 | neutral | None | None | None | None | N |
F/L | 0.5755 | likely_pathogenic | 0.587 | pathogenic | -0.527 | Destabilizing | None | N | 0.118 | neutral | N | 0.456366842 | None | None | N |
F/M | 0.2533 | likely_benign | 0.284 | benign | -0.408 | Destabilizing | 0.138 | N | 0.436 | neutral | None | None | None | None | N |
F/N | 0.2672 | likely_benign | 0.3158 | benign | -0.11 | Destabilizing | 0.022 | N | 0.593 | neutral | None | None | None | None | N |
F/P | 0.897 | likely_pathogenic | 0.9053 | pathogenic | -0.712 | Destabilizing | 0.085 | N | 0.597 | neutral | None | None | None | None | N |
F/Q | 0.5192 | ambiguous | 0.5348 | ambiguous | -0.17 | Destabilizing | 0.044 | N | 0.647 | neutral | None | None | None | None | N |
F/R | 0.5477 | ambiguous | 0.5389 | ambiguous | 0.275 | Stabilizing | 0.044 | N | 0.599 | neutral | None | None | None | None | N |
F/S | 0.1768 | likely_benign | 0.1961 | benign | -0.825 | Destabilizing | None | N | 0.228 | neutral | N | 0.396123673 | None | None | N |
F/T | 0.1888 | likely_benign | 0.2064 | benign | -0.734 | Destabilizing | None | N | 0.23 | neutral | None | None | None | None | N |
F/V | 0.0973 | likely_benign | 0.1048 | benign | -0.712 | Destabilizing | None | N | 0.137 | neutral | N | 0.474779245 | None | None | N |
F/W | 0.3798 | ambiguous | 0.3466 | ambiguous | -0.227 | Destabilizing | 0.245 | N | 0.455 | neutral | None | None | None | None | N |
F/Y | 0.1155 | likely_benign | 0.1208 | benign | -0.263 | Destabilizing | None | N | 0.13 | neutral | N | 0.471258937 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.