Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19474 | 58645;58646;58647 | chr2:178593973;178593972;178593971 | chr2:179458700;179458699;179458698 |
N2AB | 17833 | 53722;53723;53724 | chr2:178593973;178593972;178593971 | chr2:179458700;179458699;179458698 |
N2A | 16906 | 50941;50942;50943 | chr2:178593973;178593972;178593971 | chr2:179458700;179458699;179458698 |
N2B | 10409 | 31450;31451;31452 | chr2:178593973;178593972;178593971 | chr2:179458700;179458699;179458698 |
Novex-1 | 10534 | 31825;31826;31827 | chr2:178593973;178593972;178593971 | chr2:179458700;179458699;179458698 |
Novex-2 | 10601 | 32026;32027;32028 | chr2:178593973;178593972;178593971 | chr2:179458700;179458699;179458698 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1307485937 | None | 0.543 | N | 0.273 | 0.179 | 0.388653054685 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1307485937 | None | 0.543 | N | 0.273 | 0.179 | 0.388653054685 | gnomAD-4.0.0 | 6.57445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47033E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8809 | likely_pathogenic | 0.8596 | pathogenic | -2.41 | Highly Destabilizing | 0.994 | D | 0.604 | neutral | N | 0.500074741 | None | None | N |
V/C | 0.9606 | likely_pathogenic | 0.958 | pathogenic | -2.512 | Highly Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
V/D | 0.9962 | likely_pathogenic | 0.9945 | pathogenic | -2.966 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | N | 0.511938025 | None | None | N |
V/E | 0.989 | likely_pathogenic | 0.9846 | pathogenic | -2.716 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/F | 0.7646 | likely_pathogenic | 0.7149 | pathogenic | -1.528 | Destabilizing | 0.998 | D | 0.804 | deleterious | N | 0.499314272 | None | None | N |
V/G | 0.9023 | likely_pathogenic | 0.8771 | pathogenic | -2.991 | Highly Destabilizing | 0.999 | D | 0.827 | deleterious | N | 0.511938025 | None | None | N |
V/H | 0.9971 | likely_pathogenic | 0.9959 | pathogenic | -2.67 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
V/I | 0.0921 | likely_benign | 0.092 | benign | -0.764 | Destabilizing | 0.543 | D | 0.273 | neutral | N | 0.500290112 | None | None | N |
V/K | 0.9929 | likely_pathogenic | 0.9895 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/L | 0.4708 | ambiguous | 0.458 | ambiguous | -0.764 | Destabilizing | 0.948 | D | 0.587 | neutral | N | 0.485610582 | None | None | N |
V/M | 0.6386 | likely_pathogenic | 0.6084 | pathogenic | -1.112 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
V/N | 0.9878 | likely_pathogenic | 0.9837 | pathogenic | -2.487 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/P | 0.9925 | likely_pathogenic | 0.9912 | pathogenic | -1.288 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
V/Q | 0.9902 | likely_pathogenic | 0.9873 | pathogenic | -2.281 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/R | 0.988 | likely_pathogenic | 0.9828 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/S | 0.9775 | likely_pathogenic | 0.9722 | pathogenic | -3.2 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/T | 0.9384 | likely_pathogenic | 0.9283 | pathogenic | -2.782 | Highly Destabilizing | 0.996 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/W | 0.9949 | likely_pathogenic | 0.9925 | pathogenic | -1.961 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/Y | 0.9804 | likely_pathogenic | 0.9724 | pathogenic | -1.643 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.