Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19475 | 58648;58649;58650 | chr2:178593970;178593969;178593968 | chr2:179458697;179458696;179458695 |
N2AB | 17834 | 53725;53726;53727 | chr2:178593970;178593969;178593968 | chr2:179458697;179458696;179458695 |
N2A | 16907 | 50944;50945;50946 | chr2:178593970;178593969;178593968 | chr2:179458697;179458696;179458695 |
N2B | 10410 | 31453;31454;31455 | chr2:178593970;178593969;178593968 | chr2:179458697;179458696;179458695 |
Novex-1 | 10535 | 31828;31829;31830 | chr2:178593970;178593969;178593968 | chr2:179458697;179458696;179458695 |
Novex-2 | 10602 | 32029;32030;32031 | chr2:178593970;178593969;178593968 | chr2:179458697;179458696;179458695 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.56 | N | 0.409 | 0.157 | 0.287603790349 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/S | rs755738851 | 0.015 | 0.001 | N | 0.09 | 0.07 | 0.200317383148 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 8.26E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 2.81215E-04 |
N/S | rs755738851 | 0.015 | 0.001 | N | 0.09 | 0.07 | 0.200317383148 | gnomAD-4.0.0 | 4.10627E-06 | None | None | None | None | N | None | 1.19567E-04 | 0 | None | 0 | 0 | None | 0 | 3.47222E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1751 | likely_benign | 0.2127 | benign | -0.754 | Destabilizing | None | N | 0.203 | neutral | None | None | None | None | N |
N/C | 0.2341 | likely_benign | 0.2647 | benign | 0.071 | Stabilizing | 0.676 | D | 0.463 | neutral | None | None | None | None | N |
N/D | 0.1365 | likely_benign | 0.1401 | benign | -0.381 | Destabilizing | 0.055 | N | 0.265 | neutral | N | 0.477800907 | None | None | N |
N/E | 0.3139 | likely_benign | 0.3121 | benign | -0.345 | Destabilizing | 0.072 | N | 0.245 | neutral | None | None | None | None | N |
N/F | 0.3872 | ambiguous | 0.4254 | ambiguous | -0.759 | Destabilizing | 0.356 | N | 0.485 | neutral | None | None | None | None | N |
N/G | 0.3634 | ambiguous | 0.3996 | ambiguous | -1.027 | Destabilizing | 0.016 | N | 0.332 | neutral | None | None | None | None | N |
N/H | 0.0991 | likely_benign | 0.1055 | benign | -0.877 | Destabilizing | 0.56 | D | 0.409 | neutral | N | 0.484342877 | None | None | N |
N/I | 0.1231 | likely_benign | 0.1391 | benign | -0.088 | Destabilizing | 0.029 | N | 0.486 | neutral | N | 0.454366687 | None | None | N |
N/K | 0.3081 | likely_benign | 0.3059 | benign | -0.119 | Destabilizing | 0.055 | N | 0.24 | neutral | N | 0.446187134 | None | None | N |
N/L | 0.1686 | likely_benign | 0.1851 | benign | -0.088 | Destabilizing | 0.016 | N | 0.468 | neutral | None | None | None | None | N |
N/M | 0.1891 | likely_benign | 0.2143 | benign | 0.465 | Stabilizing | 0.356 | N | 0.433 | neutral | None | None | None | None | N |
N/P | 0.9323 | likely_pathogenic | 0.9266 | pathogenic | -0.281 | Destabilizing | 0.072 | N | 0.453 | neutral | None | None | None | None | N |
N/Q | 0.303 | likely_benign | 0.3245 | benign | -0.793 | Destabilizing | 0.356 | N | 0.369 | neutral | None | None | None | None | N |
N/R | 0.3291 | likely_benign | 0.3199 | benign | -0.041 | Destabilizing | 0.072 | N | 0.351 | neutral | None | None | None | None | N |
N/S | 0.0758 | likely_benign | 0.084 | benign | -0.646 | Destabilizing | 0.001 | N | 0.09 | neutral | N | 0.453499896 | None | None | N |
N/T | 0.0734 | likely_benign | 0.0833 | benign | -0.433 | Destabilizing | None | N | 0.095 | neutral | N | 0.403359077 | None | None | N |
N/V | 0.1341 | likely_benign | 0.1542 | benign | -0.281 | Destabilizing | 0.038 | N | 0.475 | neutral | None | None | None | None | N |
N/W | 0.6625 | likely_pathogenic | 0.6791 | pathogenic | -0.531 | Destabilizing | 0.864 | D | 0.528 | neutral | None | None | None | None | N |
N/Y | 0.1559 | likely_benign | 0.169 | benign | -0.323 | Destabilizing | 0.295 | N | 0.443 | neutral | N | 0.485478974 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.