Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19496 | 58711;58712;58713 | chr2:178593814;178593813;178593812 | chr2:179458541;179458540;179458539 |
N2AB | 17855 | 53788;53789;53790 | chr2:178593814;178593813;178593812 | chr2:179458541;179458540;179458539 |
N2A | 16928 | 51007;51008;51009 | chr2:178593814;178593813;178593812 | chr2:179458541;179458540;179458539 |
N2B | 10431 | 31516;31517;31518 | chr2:178593814;178593813;178593812 | chr2:179458541;179458540;179458539 |
Novex-1 | 10556 | 31891;31892;31893 | chr2:178593814;178593813;178593812 | chr2:179458541;179458540;179458539 |
Novex-2 | 10623 | 32092;32093;32094 | chr2:178593814;178593813;178593812 | chr2:179458541;179458540;179458539 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | None | None | None | N | 0.131 | 0.126 | 0.293147016451 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Y/S | None | None | 0.117 | N | 0.513 | 0.253 | 0.442567846599 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.219 | likely_benign | 0.2454 | benign | -2.605 | Highly Destabilizing | 0.149 | N | 0.482 | neutral | None | None | None | None | N |
Y/C | 0.0715 | likely_benign | 0.0846 | benign | -0.974 | Destabilizing | 0.915 | D | 0.547 | neutral | N | 0.45799049 | None | None | N |
Y/D | 0.1642 | likely_benign | 0.1919 | benign | -1.644 | Destabilizing | 0.062 | N | 0.583 | neutral | N | 0.500490474 | None | None | N |
Y/E | 0.3659 | ambiguous | 0.4198 | ambiguous | -1.567 | Destabilizing | 0.081 | N | 0.523 | neutral | None | None | None | None | N |
Y/F | 0.0724 | likely_benign | 0.0742 | benign | -1.159 | Destabilizing | None | N | 0.131 | neutral | N | 0.445157266 | None | None | N |
Y/G | 0.2229 | likely_benign | 0.2407 | benign | -2.917 | Highly Destabilizing | 0.149 | N | 0.526 | neutral | None | None | None | None | N |
Y/H | 0.0619 | likely_benign | 0.0764 | benign | -1.325 | Destabilizing | None | N | 0.101 | neutral | N | 0.406465592 | None | None | N |
Y/I | 0.3161 | likely_benign | 0.3445 | ambiguous | -1.642 | Destabilizing | 0.38 | N | 0.573 | neutral | None | None | None | None | N |
Y/K | 0.3815 | ambiguous | 0.4155 | ambiguous | -1.383 | Destabilizing | 0.149 | N | 0.561 | neutral | None | None | None | None | N |
Y/L | 0.336 | likely_benign | 0.3706 | ambiguous | -1.642 | Destabilizing | 0.081 | N | 0.472 | neutral | None | None | None | None | N |
Y/M | 0.4003 | ambiguous | 0.4423 | ambiguous | -1.151 | Destabilizing | 0.791 | D | 0.538 | neutral | None | None | None | None | N |
Y/N | 0.0607 | likely_benign | 0.0725 | benign | -1.654 | Destabilizing | 0.002 | N | 0.368 | neutral | N | 0.434862915 | None | None | N |
Y/P | 0.9695 | likely_pathogenic | 0.9728 | pathogenic | -1.962 | Destabilizing | 0.555 | D | 0.582 | neutral | None | None | None | None | N |
Y/Q | 0.219 | likely_benign | 0.2781 | benign | -1.655 | Destabilizing | 0.38 | N | 0.597 | neutral | None | None | None | None | N |
Y/R | 0.2281 | likely_benign | 0.2644 | benign | -0.817 | Destabilizing | 0.38 | N | 0.594 | neutral | None | None | None | None | N |
Y/S | 0.0642 | likely_benign | 0.0716 | benign | -2.105 | Highly Destabilizing | 0.117 | N | 0.513 | neutral | N | 0.333671626 | None | None | N |
Y/T | 0.1413 | likely_benign | 0.1595 | benign | -1.942 | Destabilizing | 0.149 | N | 0.563 | neutral | None | None | None | None | N |
Y/V | 0.241 | likely_benign | 0.2632 | benign | -1.962 | Destabilizing | 0.149 | N | 0.512 | neutral | None | None | None | None | N |
Y/W | 0.3932 | ambiguous | 0.4282 | ambiguous | -0.725 | Destabilizing | 0.935 | D | 0.485 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.