Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19497 | 58714;58715;58716 | chr2:178593811;178593810;178593809 | chr2:179458538;179458537;179458536 |
N2AB | 17856 | 53791;53792;53793 | chr2:178593811;178593810;178593809 | chr2:179458538;179458537;179458536 |
N2A | 16929 | 51010;51011;51012 | chr2:178593811;178593810;178593809 | chr2:179458538;179458537;179458536 |
N2B | 10432 | 31519;31520;31521 | chr2:178593811;178593810;178593809 | chr2:179458538;179458537;179458536 |
Novex-1 | 10557 | 31894;31895;31896 | chr2:178593811;178593810;178593809 | chr2:179458538;179458537;179458536 |
Novex-2 | 10624 | 32095;32096;32097 | chr2:178593811;178593810;178593809 | chr2:179458538;179458537;179458536 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs752006805 | 0.394 | 0.006 | N | 0.329 | 0.163 | 0.464528537357 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
M/I | rs752006805 | 0.394 | 0.006 | N | 0.329 | 0.163 | 0.464528537357 | gnomAD-4.0.0 | 2.5327E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87876E-05 | 0 | 8.2872E-05 |
M/T | rs375365886 | -1.318 | 0.492 | D | 0.767 | 0.397 | None | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.96E-06 | 0 |
M/T | rs375365886 | -1.318 | 0.492 | D | 0.767 | 0.397 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/T | rs375365886 | -1.318 | 0.492 | D | 0.767 | 0.397 | None | gnomAD-4.0.0 | 1.30194E-05 | None | None | None | None | N | None | 1.3354E-05 | 1.669E-05 | None | 0 | 0 | None | 0 | 0 | 1.27162E-05 | 1.0983E-05 | 4.80677E-05 |
M/V | rs754532919 | -0.13 | 0.041 | N | 0.431 | 0.17 | 0.43046518545 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 8.96E-06 | 0 |
M/V | rs754532919 | -0.13 | 0.041 | N | 0.431 | 0.17 | 0.43046518545 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/V | rs754532919 | -0.13 | 0.041 | N | 0.431 | 0.17 | 0.43046518545 | gnomAD-4.0.0 | 6.41185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.3942E-06 | 5.36222E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.6012 | likely_pathogenic | 0.5402 | ambiguous | -1.59 | Destabilizing | 0.207 | N | 0.673 | neutral | None | None | None | None | N |
M/C | 0.7763 | likely_pathogenic | 0.7438 | pathogenic | -2.288 | Highly Destabilizing | 0.981 | D | 0.788 | deleterious | None | None | None | None | N |
M/D | 0.9984 | likely_pathogenic | 0.9981 | pathogenic | -2.044 | Highly Destabilizing | 0.932 | D | 0.819 | deleterious | None | None | None | None | N |
M/E | 0.9868 | likely_pathogenic | 0.9855 | pathogenic | -1.758 | Destabilizing | 0.818 | D | 0.81 | deleterious | None | None | None | None | N |
M/F | 0.7348 | likely_pathogenic | 0.7553 | pathogenic | -0.122 | Destabilizing | 0.002 | N | 0.367 | neutral | None | None | None | None | N |
M/G | 0.9531 | likely_pathogenic | 0.9411 | pathogenic | -2.09 | Highly Destabilizing | 0.563 | D | 0.765 | deleterious | None | None | None | None | N |
M/H | 0.9889 | likely_pathogenic | 0.988 | pathogenic | -2.06 | Highly Destabilizing | 0.981 | D | 0.784 | deleterious | None | None | None | None | N |
M/I | 0.4464 | ambiguous | 0.415 | ambiguous | -0.127 | Destabilizing | 0.006 | N | 0.329 | neutral | N | 0.405038653 | None | None | N |
M/K | 0.9598 | likely_pathogenic | 0.9578 | pathogenic | -1.089 | Destabilizing | 0.492 | N | 0.787 | deleterious | N | 0.48315639 | None | None | N |
M/L | 0.2608 | likely_benign | 0.2561 | benign | -0.127 | Destabilizing | 0.018 | N | 0.433 | neutral | N | 0.428622015 | None | None | N |
M/N | 0.9859 | likely_pathogenic | 0.9837 | pathogenic | -1.705 | Destabilizing | 0.932 | D | 0.817 | deleterious | None | None | None | None | N |
M/P | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -0.601 | Destabilizing | 0.932 | D | 0.82 | deleterious | None | None | None | None | N |
M/Q | 0.9299 | likely_pathogenic | 0.9224 | pathogenic | -1.223 | Destabilizing | 0.932 | D | 0.713 | prob.delet. | None | None | None | None | N |
M/R | 0.9532 | likely_pathogenic | 0.9518 | pathogenic | -1.569 | Destabilizing | 0.773 | D | 0.825 | deleterious | N | 0.48315639 | None | None | N |
M/S | 0.8968 | likely_pathogenic | 0.8798 | pathogenic | -2.061 | Highly Destabilizing | 0.563 | D | 0.767 | deleterious | None | None | None | None | N |
M/T | 0.6633 | likely_pathogenic | 0.6038 | pathogenic | -1.64 | Destabilizing | 0.492 | N | 0.767 | deleterious | D | 0.522636615 | None | None | N |
M/V | 0.1046 | likely_benign | 0.0925 | benign | -0.601 | Destabilizing | 0.041 | N | 0.431 | neutral | N | 0.368269776 | None | None | N |
M/W | 0.9843 | likely_pathogenic | 0.9861 | pathogenic | -0.548 | Destabilizing | 0.944 | D | 0.776 | deleterious | None | None | None | None | N |
M/Y | 0.9747 | likely_pathogenic | 0.974 | pathogenic | -0.478 | Destabilizing | 0.241 | N | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.