Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19507 | 58744;58745;58746 | chr2:178593781;178593780;178593779 | chr2:179458508;179458507;179458506 |
N2AB | 17866 | 53821;53822;53823 | chr2:178593781;178593780;178593779 | chr2:179458508;179458507;179458506 |
N2A | 16939 | 51040;51041;51042 | chr2:178593781;178593780;178593779 | chr2:179458508;179458507;179458506 |
N2B | 10442 | 31549;31550;31551 | chr2:178593781;178593780;178593779 | chr2:179458508;179458507;179458506 |
Novex-1 | 10567 | 31924;31925;31926 | chr2:178593781;178593780;178593779 | chr2:179458508;179458507;179458506 |
Novex-2 | 10634 | 32125;32126;32127 | chr2:178593781;178593780;178593779 | chr2:179458508;179458507;179458506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs1177368382 | 0.205 | 0.989 | N | 0.696 | 0.485 | 0.515882253919 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7854 | likely_pathogenic | 0.7989 | pathogenic | -0.281 | Destabilizing | 0.978 | D | 0.599 | neutral | N | 0.492564139 | None | None | I |
D/C | 0.9419 | likely_pathogenic | 0.949 | pathogenic | 0.212 | Stabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | I |
D/E | 0.7761 | likely_pathogenic | 0.8064 | pathogenic | -0.525 | Destabilizing | 0.928 | D | 0.407 | neutral | N | 0.489246003 | None | None | I |
D/F | 0.9661 | likely_pathogenic | 0.9696 | pathogenic | -0.541 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
D/G | 0.7728 | likely_pathogenic | 0.7635 | pathogenic | -0.506 | Destabilizing | 0.865 | D | 0.467 | neutral | N | 0.506922639 | None | None | I |
D/H | 0.8309 | likely_pathogenic | 0.8627 | pathogenic | -0.839 | Destabilizing | 0.994 | D | 0.677 | prob.neutral | N | 0.509124685 | None | None | I |
D/I | 0.9053 | likely_pathogenic | 0.9321 | pathogenic | 0.269 | Stabilizing | 0.992 | D | 0.699 | prob.neutral | None | None | None | None | I |
D/K | 0.8987 | likely_pathogenic | 0.9319 | pathogenic | 0.241 | Stabilizing | 0.968 | D | 0.563 | neutral | None | None | None | None | I |
D/L | 0.9233 | likely_pathogenic | 0.9299 | pathogenic | 0.269 | Stabilizing | 0.992 | D | 0.677 | prob.neutral | None | None | None | None | I |
D/M | 0.963 | likely_pathogenic | 0.9635 | pathogenic | 0.702 | Stabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | I |
D/N | 0.2498 | likely_benign | 0.2214 | benign | -0.007 | Destabilizing | 0.039 | N | 0.204 | neutral | N | 0.472409196 | None | None | I |
D/P | 0.974 | likely_pathogenic | 0.9768 | pathogenic | 0.109 | Stabilizing | 0.992 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/Q | 0.9081 | likely_pathogenic | 0.9294 | pathogenic | 0.026 | Stabilizing | 0.983 | D | 0.676 | prob.neutral | None | None | None | None | I |
D/R | 0.9076 | likely_pathogenic | 0.9327 | pathogenic | 0.121 | Stabilizing | 0.983 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/S | 0.4538 | ambiguous | 0.4361 | ambiguous | -0.131 | Destabilizing | 0.895 | D | 0.475 | neutral | None | None | None | None | I |
D/T | 0.6446 | likely_pathogenic | 0.6116 | pathogenic | 0.05 | Stabilizing | 0.983 | D | 0.544 | neutral | None | None | None | None | I |
D/V | 0.8229 | likely_pathogenic | 0.8554 | pathogenic | 0.109 | Stabilizing | 0.989 | D | 0.696 | prob.neutral | N | 0.505655191 | None | None | I |
D/W | 0.9922 | likely_pathogenic | 0.9933 | pathogenic | -0.524 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
D/Y | 0.7643 | likely_pathogenic | 0.8086 | pathogenic | -0.326 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | D | 0.536383199 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.