Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19509 | 58750;58751;58752 | chr2:178593775;178593774;178593773 | chr2:179458502;179458501;179458500 |
N2AB | 17868 | 53827;53828;53829 | chr2:178593775;178593774;178593773 | chr2:179458502;179458501;179458500 |
N2A | 16941 | 51046;51047;51048 | chr2:178593775;178593774;178593773 | chr2:179458502;179458501;179458500 |
N2B | 10444 | 31555;31556;31557 | chr2:178593775;178593774;178593773 | chr2:179458502;179458501;179458500 |
Novex-1 | 10569 | 31930;31931;31932 | chr2:178593775;178593774;178593773 | chr2:179458502;179458501;179458500 |
Novex-2 | 10636 | 32131;32132;32133 | chr2:178593775;178593774;178593773 | chr2:179458502;179458501;179458500 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1251770626 | -0.345 | 1.0 | N | 0.695 | 0.472 | 0.4018988957 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
G/S | rs1251770626 | -0.345 | 1.0 | N | 0.695 | 0.472 | 0.4018988957 | gnomAD-4.0.0 | 1.59255E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7523 | likely_pathogenic | 0.8055 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.613 | neutral | N | 0.498526665 | None | None | I |
G/C | 0.779 | likely_pathogenic | 0.8517 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.786 | deleterious | D | 0.526545648 | None | None | I |
G/D | 0.9114 | likely_pathogenic | 0.9373 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | D | 0.52553169 | None | None | I |
G/E | 0.9391 | likely_pathogenic | 0.9608 | pathogenic | -0.322 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
G/F | 0.9685 | likely_pathogenic | 0.9753 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
G/H | 0.9624 | likely_pathogenic | 0.9738 | pathogenic | -0.255 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
G/I | 0.9586 | likely_pathogenic | 0.9738 | pathogenic | -0.339 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
G/K | 0.9613 | likely_pathogenic | 0.9748 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
G/L | 0.963 | likely_pathogenic | 0.9705 | pathogenic | -0.339 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/M | 0.9704 | likely_pathogenic | 0.9781 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
G/N | 0.9025 | likely_pathogenic | 0.9301 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
G/P | 0.9964 | likely_pathogenic | 0.9972 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
G/Q | 0.9376 | likely_pathogenic | 0.9577 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/R | 0.9091 | likely_pathogenic | 0.9341 | pathogenic | -0.08 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.504313563 | None | None | I |
G/S | 0.6213 | likely_pathogenic | 0.6909 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.505603783 | None | None | I |
G/T | 0.9206 | likely_pathogenic | 0.9452 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
G/V | 0.9375 | likely_pathogenic | 0.9586 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.537901953 | None | None | I |
G/W | 0.9589 | likely_pathogenic | 0.9699 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
G/Y | 0.9556 | likely_pathogenic | 0.9684 | pathogenic | -0.641 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.