Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19512 | 58759;58760;58761 | chr2:178593766;178593765;178593764 | chr2:179458493;179458492;179458491 |
N2AB | 17871 | 53836;53837;53838 | chr2:178593766;178593765;178593764 | chr2:179458493;179458492;179458491 |
N2A | 16944 | 51055;51056;51057 | chr2:178593766;178593765;178593764 | chr2:179458493;179458492;179458491 |
N2B | 10447 | 31564;31565;31566 | chr2:178593766;178593765;178593764 | chr2:179458493;179458492;179458491 |
Novex-1 | 10572 | 31939;31940;31941 | chr2:178593766;178593765;178593764 | chr2:179458493;179458492;179458491 |
Novex-2 | 10639 | 32140;32141;32142 | chr2:178593766;178593765;178593764 | chr2:179458493;179458492;179458491 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1343150103 | -2.227 | 0.822 | D | 0.807 | 0.545 | 0.768437955185 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1343150103 | -2.227 | 0.822 | D | 0.807 | 0.545 | 0.768437955185 | gnomAD-4.0.0 | 1.59241E-06 | None | None | None | None | I | None | 0 | 2.28959E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.976 | likely_pathogenic | 0.9693 | pathogenic | -2.146 | Highly Destabilizing | 0.86 | D | 0.717 | prob.delet. | None | None | None | None | I |
I/C | 0.9844 | likely_pathogenic | 0.9797 | pathogenic | -1.41 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | I |
I/D | 0.9962 | likely_pathogenic | 0.9959 | pathogenic | -1.686 | Destabilizing | 0.993 | D | 0.863 | deleterious | None | None | None | None | I |
I/E | 0.988 | likely_pathogenic | 0.988 | pathogenic | -1.653 | Destabilizing | 0.978 | D | 0.863 | deleterious | None | None | None | None | I |
I/F | 0.9323 | likely_pathogenic | 0.9325 | pathogenic | -1.607 | Destabilizing | 0.942 | D | 0.697 | prob.neutral | D | 0.540995236 | None | None | I |
I/G | 0.9947 | likely_pathogenic | 0.9936 | pathogenic | -2.521 | Highly Destabilizing | 0.978 | D | 0.859 | deleterious | None | None | None | None | I |
I/H | 0.9956 | likely_pathogenic | 0.9956 | pathogenic | -1.704 | Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | I |
I/K | 0.9848 | likely_pathogenic | 0.9841 | pathogenic | -1.483 | Destabilizing | 0.978 | D | 0.861 | deleterious | None | None | None | None | I |
I/L | 0.5 | ambiguous | 0.5352 | ambiguous | -1.159 | Destabilizing | 0.006 | N | 0.221 | neutral | D | 0.52339155 | None | None | I |
I/M | 0.5687 | likely_pathogenic | 0.558 | ambiguous | -0.842 | Destabilizing | 0.942 | D | 0.676 | prob.neutral | D | 0.532173826 | None | None | I |
I/N | 0.9415 | likely_pathogenic | 0.9372 | pathogenic | -1.337 | Destabilizing | 0.99 | D | 0.863 | deleterious | D | 0.54454409 | None | None | I |
I/P | 0.9617 | likely_pathogenic | 0.9451 | pathogenic | -1.459 | Destabilizing | 0.993 | D | 0.868 | deleterious | None | None | None | None | I |
I/Q | 0.9897 | likely_pathogenic | 0.9895 | pathogenic | -1.51 | Destabilizing | 0.993 | D | 0.86 | deleterious | None | None | None | None | I |
I/R | 0.9837 | likely_pathogenic | 0.9835 | pathogenic | -0.849 | Destabilizing | 0.978 | D | 0.866 | deleterious | None | None | None | None | I |
I/S | 0.977 | likely_pathogenic | 0.9717 | pathogenic | -2.025 | Highly Destabilizing | 0.97 | D | 0.833 | deleterious | D | 0.543783621 | None | None | I |
I/T | 0.9518 | likely_pathogenic | 0.9386 | pathogenic | -1.866 | Destabilizing | 0.822 | D | 0.807 | deleterious | D | 0.525679366 | None | None | I |
I/V | 0.1929 | likely_benign | 0.1395 | benign | -1.459 | Destabilizing | 0.058 | N | 0.233 | neutral | N | 0.513097199 | None | None | I |
I/W | 0.9977 | likely_pathogenic | 0.9976 | pathogenic | -1.69 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | I |
I/Y | 0.9855 | likely_pathogenic | 0.9848 | pathogenic | -1.487 | Destabilizing | 0.978 | D | 0.784 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.