Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19515 | 58768;58769;58770 | chr2:178593757;178593756;178593755 | chr2:179458484;179458483;179458482 |
N2AB | 17874 | 53845;53846;53847 | chr2:178593757;178593756;178593755 | chr2:179458484;179458483;179458482 |
N2A | 16947 | 51064;51065;51066 | chr2:178593757;178593756;178593755 | chr2:179458484;179458483;179458482 |
N2B | 10450 | 31573;31574;31575 | chr2:178593757;178593756;178593755 | chr2:179458484;179458483;179458482 |
Novex-1 | 10575 | 31948;31949;31950 | chr2:178593757;178593756;178593755 | chr2:179458484;179458483;179458482 |
Novex-2 | 10642 | 32149;32150;32151 | chr2:178593757;178593756;178593755 | chr2:179458484;179458483;179458482 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1353143854 | -2.003 | 1.0 | D | 0.858 | 0.919 | 0.87881004843 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
Y/C | rs1353143854 | -2.003 | 1.0 | D | 0.858 | 0.919 | 0.87881004843 | gnomAD-4.0.0 | 6.84406E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99577E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9977 | likely_pathogenic | 0.9967 | pathogenic | -3.598 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/C | 0.9406 | likely_pathogenic | 0.9212 | pathogenic | -2.27 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.632850028 | None | None | N |
Y/D | 0.9958 | likely_pathogenic | 0.9938 | pathogenic | -3.891 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.649303358 | None | None | N |
Y/E | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -3.686 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/F | 0.2773 | likely_benign | 0.3202 | benign | -1.289 | Destabilizing | 0.999 | D | 0.674 | neutral | D | 0.560002125 | None | None | N |
Y/G | 0.9911 | likely_pathogenic | 0.9886 | pathogenic | -3.998 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
Y/H | 0.978 | likely_pathogenic | 0.9744 | pathogenic | -2.577 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.648697945 | None | None | N |
Y/I | 0.9781 | likely_pathogenic | 0.973 | pathogenic | -2.242 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Y/K | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -2.467 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/L | 0.9562 | likely_pathogenic | 0.949 | pathogenic | -2.242 | Highly Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
Y/M | 0.9885 | likely_pathogenic | 0.9862 | pathogenic | -2.126 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Y/N | 0.9789 | likely_pathogenic | 0.9707 | pathogenic | -3.208 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.649101554 | None | None | N |
Y/P | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -2.713 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
Y/Q | 0.9988 | likely_pathogenic | 0.9983 | pathogenic | -2.98 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Y/R | 0.9953 | likely_pathogenic | 0.9938 | pathogenic | -2.149 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/S | 0.9903 | likely_pathogenic | 0.9865 | pathogenic | -3.551 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.649101554 | None | None | N |
Y/T | 0.9958 | likely_pathogenic | 0.9943 | pathogenic | -3.227 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/V | 0.9649 | likely_pathogenic | 0.9545 | pathogenic | -2.713 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
Y/W | 0.898 | likely_pathogenic | 0.8958 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.