Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19516 | 58771;58772;58773 | chr2:178593754;178593753;178593752 | chr2:179458481;179458480;179458479 |
N2AB | 17875 | 53848;53849;53850 | chr2:178593754;178593753;178593752 | chr2:179458481;179458480;179458479 |
N2A | 16948 | 51067;51068;51069 | chr2:178593754;178593753;178593752 | chr2:179458481;179458480;179458479 |
N2B | 10451 | 31576;31577;31578 | chr2:178593754;178593753;178593752 | chr2:179458481;179458480;179458479 |
Novex-1 | 10576 | 31951;31952;31953 | chr2:178593754;178593753;178593752 | chr2:179458481;179458480;179458479 |
Novex-2 | 10643 | 32152;32153;32154 | chr2:178593754;178593753;178593752 | chr2:179458481;179458480;179458479 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs776824040 | -1.754 | 0.333 | N | 0.267 | 0.105 | 0.426084969639 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
I/V | rs776824040 | -1.754 | 0.333 | N | 0.267 | 0.105 | 0.426084969639 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85932E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7734 | likely_pathogenic | 0.7562 | pathogenic | -2.462 | Highly Destabilizing | 0.992 | D | 0.563 | neutral | None | None | None | None | I |
I/C | 0.7895 | likely_pathogenic | 0.7848 | pathogenic | -1.853 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
I/D | 0.9469 | likely_pathogenic | 0.9464 | pathogenic | -2.811 | Highly Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
I/E | 0.8883 | likely_pathogenic | 0.8803 | pathogenic | -2.7 | Highly Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
I/F | 0.3632 | ambiguous | 0.3936 | ambiguous | -1.634 | Destabilizing | 0.998 | D | 0.66 | neutral | N | 0.518172157 | None | None | I |
I/G | 0.9257 | likely_pathogenic | 0.9266 | pathogenic | -2.902 | Highly Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
I/H | 0.7107 | likely_pathogenic | 0.7411 | pathogenic | -2.197 | Highly Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
I/K | 0.6878 | likely_pathogenic | 0.6996 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
I/L | 0.2586 | likely_benign | 0.2536 | benign | -1.239 | Destabilizing | 0.889 | D | 0.409 | neutral | N | 0.508416524 | None | None | I |
I/M | 0.2392 | likely_benign | 0.2187 | benign | -1.097 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | N | 0.487827198 | None | None | I |
I/N | 0.5574 | ambiguous | 0.5811 | pathogenic | -2.023 | Highly Destabilizing | 0.999 | D | 0.745 | deleterious | N | 0.476898512 | None | None | I |
I/P | 0.9941 | likely_pathogenic | 0.9929 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
I/Q | 0.7371 | likely_pathogenic | 0.7413 | pathogenic | -2.093 | Highly Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
I/R | 0.5441 | ambiguous | 0.5735 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
I/S | 0.5936 | likely_pathogenic | 0.6055 | pathogenic | -2.655 | Highly Destabilizing | 0.998 | D | 0.641 | neutral | N | 0.46509768 | None | None | I |
I/T | 0.4707 | ambiguous | 0.4815 | ambiguous | -2.421 | Highly Destabilizing | 0.989 | D | 0.609 | neutral | N | 0.480864563 | None | None | I |
I/V | 0.114 | likely_benign | 0.0974 | benign | -1.623 | Destabilizing | 0.333 | N | 0.267 | neutral | N | 0.45031237 | None | None | I |
I/W | 0.8874 | likely_pathogenic | 0.9052 | pathogenic | -1.917 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
I/Y | 0.6898 | likely_pathogenic | 0.7461 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.