Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19521 | 58786;58787;58788 | chr2:178593739;178593738;178593737 | chr2:179458466;179458465;179458464 |
N2AB | 17880 | 53863;53864;53865 | chr2:178593739;178593738;178593737 | chr2:179458466;179458465;179458464 |
N2A | 16953 | 51082;51083;51084 | chr2:178593739;178593738;178593737 | chr2:179458466;179458465;179458464 |
N2B | 10456 | 31591;31592;31593 | chr2:178593739;178593738;178593737 | chr2:179458466;179458465;179458464 |
Novex-1 | 10581 | 31966;31967;31968 | chr2:178593739;178593738;178593737 | chr2:179458466;179458465;179458464 |
Novex-2 | 10648 | 32167;32168;32169 | chr2:178593739;178593738;178593737 | chr2:179458466;179458465;179458464 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1156295835 | -1.244 | 0.001 | N | 0.083 | 0.039 | 0.0611884634855 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.97E-05 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/D | rs1156295835 | -1.244 | 0.001 | N | 0.083 | 0.039 | 0.0611884634855 | gnomAD-4.0.0 | 3.18433E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.77008E-05 | 0 | None | 0 | 0 | 2.8593E-06 | 0 | 0 |
E/G | rs543122164 | -1.112 | 0.549 | N | 0.456 | 0.32 | 0.482209950775 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
E/G | rs543122164 | -1.112 | 0.549 | N | 0.456 | 0.32 | 0.482209950775 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94175E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs543122164 | -1.112 | 0.549 | N | 0.456 | 0.32 | 0.482209950775 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/G | rs543122164 | -1.112 | 0.549 | N | 0.456 | 0.32 | 0.482209950775 | gnomAD-4.0.0 | 2.56333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.86997E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs746319976 | -0.338 | 0.549 | N | 0.381 | 0.223 | 0.394384168047 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 0 | 1.45214E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs746319976 | -0.338 | 0.549 | N | 0.381 | 0.223 | 0.394384168047 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 1.31113E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs746319976 | -0.338 | 0.549 | N | 0.381 | 0.223 | 0.394384168047 | gnomAD-4.0.0 | 5.579E-06 | None | None | None | None | N | None | 0 | 1.5017E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | rs543122164 | 0.553 | 0.896 | N | 0.457 | 0.388 | 0.640367608718 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3751 | ambiguous | 0.2 | benign | -0.663 | Destabilizing | 0.549 | D | 0.399 | neutral | N | 0.470105018 | None | None | N |
E/C | 0.9547 | likely_pathogenic | 0.8839 | pathogenic | -0.529 | Destabilizing | 0.992 | D | 0.534 | neutral | None | None | None | None | N |
E/D | 0.179 | likely_benign | 0.1259 | benign | -1.226 | Destabilizing | 0.001 | N | 0.083 | neutral | N | 0.419704248 | None | None | N |
E/F | 0.9413 | likely_pathogenic | 0.857 | pathogenic | 0.136 | Stabilizing | 0.972 | D | 0.523 | neutral | None | None | None | None | N |
E/G | 0.5183 | ambiguous | 0.325 | benign | -1.064 | Destabilizing | 0.549 | D | 0.456 | neutral | N | 0.472435649 | None | None | N |
E/H | 0.8693 | likely_pathogenic | 0.7289 | pathogenic | -0.13 | Destabilizing | 0.972 | D | 0.404 | neutral | None | None | None | None | N |
E/I | 0.6425 | likely_pathogenic | 0.4249 | ambiguous | 0.441 | Stabilizing | 0.92 | D | 0.539 | neutral | None | None | None | None | N |
E/K | 0.7126 | likely_pathogenic | 0.5065 | ambiguous | -0.763 | Destabilizing | 0.549 | D | 0.381 | neutral | N | 0.494892653 | None | None | N |
E/L | 0.7017 | likely_pathogenic | 0.4852 | ambiguous | 0.441 | Stabilizing | 0.92 | D | 0.481 | neutral | None | None | None | None | N |
E/M | 0.7405 | likely_pathogenic | 0.545 | ambiguous | 0.782 | Stabilizing | 0.992 | D | 0.476 | neutral | None | None | None | None | N |
E/N | 0.6023 | likely_pathogenic | 0.3943 | ambiguous | -1.312 | Destabilizing | 0.447 | N | 0.356 | neutral | None | None | None | None | N |
E/P | 0.8182 | likely_pathogenic | 0.6448 | pathogenic | 0.095 | Stabilizing | 0.766 | D | 0.377 | neutral | None | None | None | None | N |
E/Q | 0.4744 | ambiguous | 0.3046 | benign | -1.12 | Destabilizing | 0.549 | D | 0.398 | neutral | N | 0.510246108 | None | None | N |
E/R | 0.8009 | likely_pathogenic | 0.6337 | pathogenic | -0.392 | Destabilizing | 0.92 | D | 0.387 | neutral | None | None | None | None | N |
E/S | 0.5689 | likely_pathogenic | 0.3312 | benign | -1.625 | Destabilizing | 0.25 | N | 0.387 | neutral | None | None | None | None | N |
E/T | 0.6078 | likely_pathogenic | 0.3833 | ambiguous | -1.289 | Destabilizing | 0.617 | D | 0.345 | neutral | None | None | None | None | N |
E/V | 0.4538 | ambiguous | 0.2564 | benign | 0.095 | Stabilizing | 0.896 | D | 0.457 | neutral | N | 0.475398164 | None | None | N |
E/W | 0.9788 | likely_pathogenic | 0.9424 | pathogenic | 0.38 | Stabilizing | 0.992 | D | 0.612 | neutral | None | None | None | None | N |
E/Y | 0.8939 | likely_pathogenic | 0.7668 | pathogenic | 0.375 | Stabilizing | 0.972 | D | 0.501 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.