Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19528 | 58807;58808;58809 | chr2:178593718;178593717;178593716 | chr2:179458445;179458444;179458443 |
N2AB | 17887 | 53884;53885;53886 | chr2:178593718;178593717;178593716 | chr2:179458445;179458444;179458443 |
N2A | 16960 | 51103;51104;51105 | chr2:178593718;178593717;178593716 | chr2:179458445;179458444;179458443 |
N2B | 10463 | 31612;31613;31614 | chr2:178593718;178593717;178593716 | chr2:179458445;179458444;179458443 |
Novex-1 | 10588 | 31987;31988;31989 | chr2:178593718;178593717;178593716 | chr2:179458445;179458444;179458443 |
Novex-2 | 10655 | 32188;32189;32190 | chr2:178593718;178593717;178593716 | chr2:179458445;179458444;179458443 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | 0.324 | N | 0.352 | 0.265 | 0.710242159801 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.5046 | ambiguous | 0.4561 | ambiguous | -1.714 | Destabilizing | 0.207 | N | 0.377 | neutral | None | None | None | None | N |
M/C | 0.7816 | likely_pathogenic | 0.6999 | pathogenic | -1.223 | Destabilizing | 0.981 | D | 0.355 | neutral | None | None | None | None | N |
M/D | 0.8593 | likely_pathogenic | 0.8303 | pathogenic | -0.641 | Destabilizing | 0.818 | D | 0.376 | neutral | None | None | None | None | N |
M/E | 0.5573 | ambiguous | 0.5081 | ambiguous | -0.6 | Destabilizing | 0.818 | D | 0.361 | neutral | None | None | None | None | N |
M/F | 0.35 | ambiguous | 0.3105 | benign | -0.667 | Destabilizing | 0.241 | N | 0.341 | neutral | None | None | None | None | N |
M/G | 0.712 | likely_pathogenic | 0.7035 | pathogenic | -2.015 | Highly Destabilizing | 0.563 | D | 0.366 | neutral | None | None | None | None | N |
M/H | 0.5476 | ambiguous | 0.4735 | ambiguous | -0.94 | Destabilizing | 0.981 | D | 0.34 | neutral | None | None | None | None | N |
M/I | 0.2698 | likely_benign | 0.2391 | benign | -0.932 | Destabilizing | 0.001 | N | 0.111 | neutral | N | 0.41352485 | None | None | N |
M/K | 0.3261 | likely_benign | 0.2771 | benign | -0.725 | Destabilizing | 0.492 | N | 0.369 | neutral | N | 0.400112836 | None | None | N |
M/L | 0.1312 | likely_benign | 0.1087 | benign | -0.932 | Destabilizing | 0.001 | N | 0.095 | neutral | N | 0.415333004 | None | None | N |
M/N | 0.4596 | ambiguous | 0.4451 | ambiguous | -0.644 | Destabilizing | 0.932 | D | 0.371 | neutral | None | None | None | None | N |
M/P | 0.9711 | likely_pathogenic | 0.9661 | pathogenic | -1.168 | Destabilizing | 0.932 | D | 0.371 | neutral | None | None | None | None | N |
M/Q | 0.2984 | likely_benign | 0.2568 | benign | -0.711 | Destabilizing | 0.932 | D | 0.377 | neutral | None | None | None | None | N |
M/R | 0.3984 | ambiguous | 0.3267 | benign | -0.156 | Destabilizing | 0.773 | D | 0.385 | neutral | N | 0.430686459 | None | None | N |
M/S | 0.4397 | ambiguous | 0.4098 | ambiguous | -1.218 | Destabilizing | 0.563 | D | 0.341 | neutral | None | None | None | None | N |
M/T | 0.2961 | likely_benign | 0.2599 | benign | -1.072 | Destabilizing | 0.324 | N | 0.352 | neutral | N | 0.38148979 | None | None | N |
M/V | 0.1256 | likely_benign | 0.1144 | benign | -1.168 | Destabilizing | 0.015 | N | 0.175 | neutral | N | 0.410772547 | None | None | N |
M/W | 0.7208 | likely_pathogenic | 0.6308 | pathogenic | -0.607 | Destabilizing | 0.981 | D | 0.369 | neutral | None | None | None | None | N |
M/Y | 0.5607 | ambiguous | 0.5076 | ambiguous | -0.654 | Destabilizing | 0.818 | D | 0.382 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.