Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19530 | 58813;58814;58815 | chr2:178593712;178593711;178593710 | chr2:179458439;179458438;179458437 |
N2AB | 17889 | 53890;53891;53892 | chr2:178593712;178593711;178593710 | chr2:179458439;179458438;179458437 |
N2A | 16962 | 51109;51110;51111 | chr2:178593712;178593711;178593710 | chr2:179458439;179458438;179458437 |
N2B | 10465 | 31618;31619;31620 | chr2:178593712;178593711;178593710 | chr2:179458439;179458438;179458437 |
Novex-1 | 10590 | 31993;31994;31995 | chr2:178593712;178593711;178593710 | chr2:179458439;179458438;179458437 |
Novex-2 | 10657 | 32194;32195;32196 | chr2:178593712;178593711;178593710 | chr2:179458439;179458438;179458437 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1187285216 | -1.618 | 0.999 | N | 0.563 | 0.389 | 0.604839314244 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/A | rs1187285216 | -1.618 | 0.999 | N | 0.563 | 0.389 | 0.604839314244 | gnomAD-4.0.0 | 3.18425E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78133E-05 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5517 | ambiguous | 0.5735 | pathogenic | -1.2 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.468824344 | None | None | I |
V/C | 0.8917 | likely_pathogenic | 0.8711 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
V/D | 0.9806 | likely_pathogenic | 0.9834 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
V/E | 0.9317 | likely_pathogenic | 0.9455 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.502550865 | None | None | I |
V/F | 0.5218 | ambiguous | 0.56 | ambiguous | -1.03 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
V/G | 0.8414 | likely_pathogenic | 0.8619 | pathogenic | -1.469 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.507857237 | None | None | I |
V/H | 0.9716 | likely_pathogenic | 0.9773 | pathogenic | -1.025 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
V/I | 0.1079 | likely_benign | 0.1056 | benign | -0.584 | Destabilizing | 0.998 | D | 0.489 | neutral | None | None | None | None | I |
V/K | 0.9676 | likely_pathogenic | 0.9759 | pathogenic | -1.118 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
V/L | 0.5612 | ambiguous | 0.5998 | pathogenic | -0.584 | Destabilizing | 0.997 | D | 0.543 | neutral | N | 0.520519029 | None | None | I |
V/M | 0.4403 | ambiguous | 0.464 | ambiguous | -0.458 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.494779412 | None | None | I |
V/N | 0.9389 | likely_pathogenic | 0.9455 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
V/P | 0.9857 | likely_pathogenic | 0.9884 | pathogenic | -0.753 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
V/Q | 0.9219 | likely_pathogenic | 0.9377 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
V/R | 0.9529 | likely_pathogenic | 0.9611 | pathogenic | -0.56 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
V/S | 0.7985 | likely_pathogenic | 0.8102 | pathogenic | -1.291 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
V/T | 0.6917 | likely_pathogenic | 0.7153 | pathogenic | -1.22 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | I |
V/W | 0.9869 | likely_pathogenic | 0.989 | pathogenic | -1.191 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
V/Y | 0.9157 | likely_pathogenic | 0.9267 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.