Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19536 | 58831;58832;58833 | chr2:178593694;178593693;178593692 | chr2:179458421;179458420;179458419 |
N2AB | 17895 | 53908;53909;53910 | chr2:178593694;178593693;178593692 | chr2:179458421;179458420;179458419 |
N2A | 16968 | 51127;51128;51129 | chr2:178593694;178593693;178593692 | chr2:179458421;179458420;179458419 |
N2B | 10471 | 31636;31637;31638 | chr2:178593694;178593693;178593692 | chr2:179458421;179458420;179458419 |
Novex-1 | 10596 | 32011;32012;32013 | chr2:178593694;178593693;178593692 | chr2:179458421;179458420;179458419 |
Novex-2 | 10663 | 32212;32213;32214 | chr2:178593694;178593693;178593692 | chr2:179458421;179458420;179458419 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.961 | N | 0.459 | 0.266 | 0.33340067248 | gnomAD-4.0.0 | 3.18421E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86607E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3898 | ambiguous | 0.364 | ambiguous | -0.01 | Destabilizing | 0.97 | D | 0.498 | neutral | None | None | None | None | N |
K/C | 0.7619 | likely_pathogenic | 0.7667 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
K/D | 0.6212 | likely_pathogenic | 0.572 | pathogenic | 0.081 | Stabilizing | 0.996 | D | 0.54 | neutral | None | None | None | None | N |
K/E | 0.2531 | likely_benign | 0.2254 | benign | 0.097 | Stabilizing | 0.961 | D | 0.459 | neutral | N | 0.482075284 | None | None | N |
K/F | 0.837 | likely_pathogenic | 0.8186 | pathogenic | -0.215 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
K/G | 0.5049 | ambiguous | 0.4603 | ambiguous | -0.202 | Destabilizing | 0.985 | D | 0.484 | neutral | None | None | None | None | N |
K/H | 0.4245 | ambiguous | 0.408 | ambiguous | -0.387 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
K/I | 0.4419 | ambiguous | 0.4451 | ambiguous | 0.418 | Stabilizing | 0.998 | D | 0.617 | neutral | N | 0.477649435 | None | None | N |
K/L | 0.4698 | ambiguous | 0.4564 | ambiguous | 0.418 | Stabilizing | 0.97 | D | 0.484 | neutral | None | None | None | None | N |
K/M | 0.3193 | likely_benign | 0.3062 | benign | 0.069 | Stabilizing | 1.0 | D | 0.573 | neutral | None | None | None | None | N |
K/N | 0.4947 | ambiguous | 0.447 | ambiguous | 0.074 | Stabilizing | 0.994 | D | 0.49 | neutral | N | 0.492988498 | None | None | N |
K/P | 0.8664 | likely_pathogenic | 0.8549 | pathogenic | 0.303 | Stabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
K/Q | 0.1793 | likely_benign | 0.1658 | benign | -0.039 | Destabilizing | 0.989 | D | 0.509 | neutral | N | 0.474709382 | None | None | N |
K/R | 0.0872 | likely_benign | 0.0851 | benign | -0.082 | Destabilizing | 0.031 | N | 0.159 | neutral | N | 0.452429955 | None | None | N |
K/S | 0.4821 | ambiguous | 0.4348 | ambiguous | -0.387 | Destabilizing | 0.985 | D | 0.457 | neutral | None | None | None | None | N |
K/T | 0.2296 | likely_benign | 0.2035 | benign | -0.221 | Destabilizing | 0.98 | D | 0.535 | neutral | N | 0.464412243 | None | None | N |
K/V | 0.3879 | ambiguous | 0.3731 | ambiguous | 0.303 | Stabilizing | 0.996 | D | 0.526 | neutral | None | None | None | None | N |
K/W | 0.8552 | likely_pathogenic | 0.8477 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/Y | 0.7202 | likely_pathogenic | 0.7146 | pathogenic | 0.091 | Stabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.