Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19541 | 58846;58847;58848 | chr2:178593679;178593678;178593677 | chr2:179458406;179458405;179458404 |
N2AB | 17900 | 53923;53924;53925 | chr2:178593679;178593678;178593677 | chr2:179458406;179458405;179458404 |
N2A | 16973 | 51142;51143;51144 | chr2:178593679;178593678;178593677 | chr2:179458406;179458405;179458404 |
N2B | 10476 | 31651;31652;31653 | chr2:178593679;178593678;178593677 | chr2:179458406;179458405;179458404 |
Novex-1 | 10601 | 32026;32027;32028 | chr2:178593679;178593678;178593677 | chr2:179458406;179458405;179458404 |
Novex-2 | 10668 | 32227;32228;32229 | chr2:178593679;178593678;178593677 | chr2:179458406;179458405;179458404 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs760841948 | -2.293 | 0.025 | N | 0.373 | 0.211 | 0.427596317008 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/A | rs760841948 | -2.293 | 0.025 | N | 0.373 | 0.211 | 0.427596317008 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6485 | likely_pathogenic | 0.4498 | ambiguous | -1.959 | Destabilizing | 0.025 | N | 0.373 | neutral | N | 0.482442964 | None | None | N |
V/C | 0.9174 | likely_pathogenic | 0.8645 | pathogenic | -1.429 | Destabilizing | 0.997 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.9854 | likely_pathogenic | 0.9697 | pathogenic | -2.445 | Highly Destabilizing | 0.983 | D | 0.85 | deleterious | N | 0.497913873 | None | None | N |
V/E | 0.9676 | likely_pathogenic | 0.9413 | pathogenic | -2.244 | Highly Destabilizing | 0.975 | D | 0.821 | deleterious | None | None | None | None | N |
V/F | 0.582 | likely_pathogenic | 0.4508 | ambiguous | -1.197 | Destabilizing | 0.967 | D | 0.756 | deleterious | N | 0.492238652 | None | None | N |
V/G | 0.8378 | likely_pathogenic | 0.7296 | pathogenic | -2.474 | Highly Destabilizing | 0.935 | D | 0.807 | deleterious | D | 0.539655791 | None | None | N |
V/H | 0.9871 | likely_pathogenic | 0.9751 | pathogenic | -2.146 | Highly Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
V/I | 0.0955 | likely_benign | 0.0944 | benign | -0.539 | Destabilizing | 0.025 | N | 0.272 | neutral | N | 0.49329793 | None | None | N |
V/K | 0.9843 | likely_pathogenic | 0.9725 | pathogenic | -1.801 | Destabilizing | 0.975 | D | 0.82 | deleterious | None | None | None | None | N |
V/L | 0.5675 | likely_pathogenic | 0.4815 | ambiguous | -0.539 | Destabilizing | 0.63 | D | 0.621 | neutral | N | 0.466049186 | None | None | N |
V/M | 0.5584 | ambiguous | 0.4609 | ambiguous | -0.478 | Destabilizing | 0.975 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/N | 0.9532 | likely_pathogenic | 0.9135 | pathogenic | -2.053 | Highly Destabilizing | 0.987 | D | 0.849 | deleterious | None | None | None | None | N |
V/P | 0.969 | likely_pathogenic | 0.9472 | pathogenic | -0.983 | Destabilizing | 0.987 | D | 0.823 | deleterious | None | None | None | None | N |
V/Q | 0.9705 | likely_pathogenic | 0.9473 | pathogenic | -1.929 | Destabilizing | 0.987 | D | 0.833 | deleterious | None | None | None | None | N |
V/R | 0.974 | likely_pathogenic | 0.9562 | pathogenic | -1.567 | Destabilizing | 0.987 | D | 0.841 | deleterious | None | None | None | None | N |
V/S | 0.8741 | likely_pathogenic | 0.764 | pathogenic | -2.651 | Highly Destabilizing | 0.95 | D | 0.801 | deleterious | None | None | None | None | N |
V/T | 0.7921 | likely_pathogenic | 0.6646 | pathogenic | -2.303 | Highly Destabilizing | 0.916 | D | 0.661 | neutral | None | None | None | None | N |
V/W | 0.991 | likely_pathogenic | 0.9814 | pathogenic | -1.674 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
V/Y | 0.9396 | likely_pathogenic | 0.8942 | pathogenic | -1.275 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.