Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19543 | 58852;58853;58854 | chr2:178593673;178593672;178593671 | chr2:179458400;179458399;179458398 |
N2AB | 17902 | 53929;53930;53931 | chr2:178593673;178593672;178593671 | chr2:179458400;179458399;179458398 |
N2A | 16975 | 51148;51149;51150 | chr2:178593673;178593672;178593671 | chr2:179458400;179458399;179458398 |
N2B | 10478 | 31657;31658;31659 | chr2:178593673;178593672;178593671 | chr2:179458400;179458399;179458398 |
Novex-1 | 10603 | 32032;32033;32034 | chr2:178593673;178593672;178593671 | chr2:179458400;179458399;179458398 |
Novex-2 | 10670 | 32233;32234;32235 | chr2:178593673;178593672;178593671 | chr2:179458400;179458399;179458398 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.999 | N | 0.613 | 0.337 | 0.357313475932 | gnomAD-4.0.0 | 1.59232E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6806 | likely_pathogenic | 0.6302 | pathogenic | -0.034 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
K/C | 0.832 | likely_pathogenic | 0.8126 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/D | 0.7679 | likely_pathogenic | 0.7298 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
K/E | 0.5704 | likely_pathogenic | 0.5168 | ambiguous | -0.311 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.502818703 | None | None | N |
K/F | 0.9324 | likely_pathogenic | 0.916 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/G | 0.5926 | likely_pathogenic | 0.5514 | ambiguous | -0.145 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
K/H | 0.41 | ambiguous | 0.3843 | ambiguous | -0.21 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/I | 0.8326 | likely_pathogenic | 0.7901 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.485398116 | None | None | N |
K/L | 0.7227 | likely_pathogenic | 0.6803 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
K/M | 0.6143 | likely_pathogenic | 0.5706 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/N | 0.6353 | likely_pathogenic | 0.5956 | pathogenic | -0.054 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.427203437 | None | None | N |
K/P | 0.8743 | likely_pathogenic | 0.8446 | pathogenic | 0.126 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
K/Q | 0.3103 | likely_benign | 0.2769 | benign | -0.204 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.479357729 | None | None | N |
K/R | 0.0948 | likely_benign | 0.0923 | benign | -0.129 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.492911141 | None | None | N |
K/S | 0.6809 | likely_pathogenic | 0.6283 | pathogenic | -0.429 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/T | 0.534 | ambiguous | 0.48 | ambiguous | -0.337 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.473281342 | None | None | N |
K/V | 0.7501 | likely_pathogenic | 0.6953 | pathogenic | 0.126 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/W | 0.9136 | likely_pathogenic | 0.8967 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/Y | 0.8063 | likely_pathogenic | 0.7739 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.