Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19557 | 58894;58895;58896 | chr2:178593631;178593630;178593629 | chr2:179458358;179458357;179458356 |
N2AB | 17916 | 53971;53972;53973 | chr2:178593631;178593630;178593629 | chr2:179458358;179458357;179458356 |
N2A | 16989 | 51190;51191;51192 | chr2:178593631;178593630;178593629 | chr2:179458358;179458357;179458356 |
N2B | 10492 | 31699;31700;31701 | chr2:178593631;178593630;178593629 | chr2:179458358;179458357;179458356 |
Novex-1 | 10617 | 32074;32075;32076 | chr2:178593631;178593630;178593629 | chr2:179458358;179458357;179458356 |
Novex-2 | 10684 | 32275;32276;32277 | chr2:178593631;178593630;178593629 | chr2:179458358;179458357;179458356 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.956 | N | 0.513 | 0.282 | 0.34854441366 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5757 | likely_pathogenic | 0.5142 | ambiguous | -0.614 | Destabilizing | 0.978 | D | 0.571 | neutral | N | 0.4690117 | None | None | I |
E/C | 0.9667 | likely_pathogenic | 0.9563 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
E/D | 0.9313 | likely_pathogenic | 0.9146 | pathogenic | -1.289 | Destabilizing | 0.948 | D | 0.483 | neutral | N | 0.491612633 | None | None | I |
E/F | 0.9885 | likely_pathogenic | 0.9811 | pathogenic | -0.868 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | I |
E/G | 0.771 | likely_pathogenic | 0.7198 | pathogenic | -0.922 | Destabilizing | 0.989 | D | 0.689 | prob.neutral | N | 0.496385573 | None | None | I |
E/H | 0.9555 | likely_pathogenic | 0.9415 | pathogenic | -1.171 | Destabilizing | 0.998 | D | 0.6 | neutral | None | None | None | None | I |
E/I | 0.8084 | likely_pathogenic | 0.728 | pathogenic | 0.204 | Stabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
E/K | 0.5557 | ambiguous | 0.4938 | ambiguous | -0.473 | Destabilizing | 0.956 | D | 0.513 | neutral | N | 0.517190723 | None | None | I |
E/L | 0.9343 | likely_pathogenic | 0.9018 | pathogenic | 0.204 | Stabilizing | 0.995 | D | 0.759 | deleterious | None | None | None | None | I |
E/M | 0.8364 | likely_pathogenic | 0.7749 | pathogenic | 0.687 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
E/N | 0.9368 | likely_pathogenic | 0.916 | pathogenic | -0.752 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | I |
E/P | 0.9985 | likely_pathogenic | 0.9983 | pathogenic | -0.047 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
E/Q | 0.2486 | likely_benign | 0.2191 | benign | -0.665 | Destabilizing | 0.63 | D | 0.192 | neutral | N | 0.472226437 | None | None | I |
E/R | 0.7142 | likely_pathogenic | 0.6721 | pathogenic | -0.503 | Destabilizing | 0.983 | D | 0.553 | neutral | None | None | None | None | I |
E/S | 0.7597 | likely_pathogenic | 0.7097 | pathogenic | -1.096 | Destabilizing | 0.983 | D | 0.497 | neutral | None | None | None | None | I |
E/T | 0.7623 | likely_pathogenic | 0.7068 | pathogenic | -0.829 | Destabilizing | 0.992 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/V | 0.5396 | ambiguous | 0.4439 | ambiguous | -0.047 | Destabilizing | 0.997 | D | 0.743 | deleterious | N | 0.463387949 | None | None | I |
E/W | 0.9971 | likely_pathogenic | 0.9957 | pathogenic | -0.94 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
E/Y | 0.9845 | likely_pathogenic | 0.9776 | pathogenic | -0.66 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.