Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19574 | 58945;58946;58947 | chr2:178593580;178593579;178593578 | chr2:179458307;179458306;179458305 |
N2AB | 17933 | 54022;54023;54024 | chr2:178593580;178593579;178593578 | chr2:179458307;179458306;179458305 |
N2A | 17006 | 51241;51242;51243 | chr2:178593580;178593579;178593578 | chr2:179458307;179458306;179458305 |
N2B | 10509 | 31750;31751;31752 | chr2:178593580;178593579;178593578 | chr2:179458307;179458306;179458305 |
Novex-1 | 10634 | 32125;32126;32127 | chr2:178593580;178593579;178593578 | chr2:179458307;179458306;179458305 |
Novex-2 | 10701 | 32326;32327;32328 | chr2:178593580;178593579;178593578 | chr2:179458307;179458306;179458305 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1032128606 | None | 0.104 | N | 0.431 | 0.246 | 0.27132560031 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs1032128606 | None | 0.104 | N | 0.431 | 0.246 | 0.27132560031 | gnomAD-4.0.0 | 6.57376E-06 | None | None | None | None | N | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3896 | ambiguous | 0.3864 | ambiguous | -0.2 | Destabilizing | 0.236 | N | 0.479 | neutral | None | None | None | None | N |
K/C | 0.6444 | likely_pathogenic | 0.661 | pathogenic | -0.317 | Destabilizing | 0.962 | D | 0.76 | deleterious | None | None | None | None | N |
K/D | 0.8064 | likely_pathogenic | 0.807 | pathogenic | 0.017 | Stabilizing | 0.519 | D | 0.552 | neutral | None | None | None | None | N |
K/E | 0.2018 | likely_benign | 0.2001 | benign | 0.07 | Stabilizing | 0.104 | N | 0.431 | neutral | N | 0.493019709 | None | None | N |
K/F | 0.7941 | likely_pathogenic | 0.7914 | pathogenic | -0.074 | Destabilizing | 0.892 | D | 0.727 | deleterious | None | None | None | None | N |
K/G | 0.5907 | likely_pathogenic | 0.5749 | pathogenic | -0.498 | Destabilizing | 0.519 | D | 0.451 | neutral | None | None | None | None | N |
K/H | 0.4167 | ambiguous | 0.426 | ambiguous | -0.845 | Destabilizing | 0.892 | D | 0.501 | neutral | None | None | None | None | N |
K/I | 0.3469 | ambiguous | 0.3647 | ambiguous | 0.534 | Stabilizing | 0.623 | D | 0.78 | deleterious | N | 0.505785274 | None | None | N |
K/L | 0.4638 | ambiguous | 0.4536 | ambiguous | 0.534 | Stabilizing | 0.519 | D | 0.451 | neutral | None | None | None | None | N |
K/M | 0.2528 | likely_benign | 0.2562 | benign | 0.337 | Stabilizing | 0.962 | D | 0.493 | neutral | None | None | None | None | N |
K/N | 0.6467 | likely_pathogenic | 0.6684 | pathogenic | -0.041 | Destabilizing | 0.449 | N | 0.575 | neutral | N | 0.515874132 | None | None | N |
K/P | 0.9744 | likely_pathogenic | 0.9686 | pathogenic | 0.32 | Stabilizing | 0.687 | D | 0.538 | neutral | None | None | None | None | N |
K/Q | 0.1395 | likely_benign | 0.1453 | benign | -0.195 | Destabilizing | 0.29 | N | 0.601 | neutral | N | 0.512508127 | None | None | N |
K/R | 0.0798 | likely_benign | 0.0797 | benign | -0.362 | Destabilizing | 0.001 | N | 0.203 | neutral | N | 0.483705372 | None | None | N |
K/S | 0.5223 | ambiguous | 0.5307 | ambiguous | -0.607 | Destabilizing | 0.236 | N | 0.602 | neutral | None | None | None | None | N |
K/T | 0.1955 | likely_benign | 0.2052 | benign | -0.379 | Destabilizing | 0.449 | N | 0.529 | neutral | N | 0.490172554 | None | None | N |
K/V | 0.2743 | likely_benign | 0.2829 | benign | 0.32 | Stabilizing | 0.519 | D | 0.705 | prob.delet. | None | None | None | None | N |
K/W | 0.8112 | likely_pathogenic | 0.7969 | pathogenic | 0.013 | Stabilizing | 0.962 | D | 0.757 | deleterious | None | None | None | None | N |
K/Y | 0.7106 | likely_pathogenic | 0.7158 | pathogenic | 0.31 | Stabilizing | 0.687 | D | 0.694 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.