Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19575 | 58948;58949;58950 | chr2:178593577;178593576;178593575 | chr2:179458304;179458303;179458302 |
N2AB | 17934 | 54025;54026;54027 | chr2:178593577;178593576;178593575 | chr2:179458304;179458303;179458302 |
N2A | 17007 | 51244;51245;51246 | chr2:178593577;178593576;178593575 | chr2:179458304;179458303;179458302 |
N2B | 10510 | 31753;31754;31755 | chr2:178593577;178593576;178593575 | chr2:179458304;179458303;179458302 |
Novex-1 | 10635 | 32128;32129;32130 | chr2:178593577;178593576;178593575 | chr2:179458304;179458303;179458302 |
Novex-2 | 10702 | 32329;32330;32331 | chr2:178593577;178593576;178593575 | chr2:179458304;179458303;179458302 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs748522705 | 0.109 | 0.995 | N | 0.771 | 0.464 | 0.426670027402 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/Y | rs748522705 | 0.109 | 0.995 | N | 0.771 | 0.464 | 0.426670027402 | gnomAD-4.0.0 | 1.5961E-06 | None | None | None | None | N | None | 0 | 2.30213E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7198 | likely_pathogenic | 0.6533 | pathogenic | -0.043 | Destabilizing | 0.804 | D | 0.605 | neutral | N | 0.519874029 | None | None | N |
D/C | 0.9145 | likely_pathogenic | 0.8892 | pathogenic | -0.03 | Destabilizing | 0.996 | D | 0.829 | deleterious | None | None | None | None | N |
D/E | 0.6728 | likely_pathogenic | 0.5993 | pathogenic | -0.215 | Destabilizing | 0.007 | N | 0.365 | neutral | D | 0.530917742 | None | None | N |
D/F | 0.9235 | likely_pathogenic | 0.9013 | pathogenic | -0.073 | Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
D/G | 0.6183 | likely_pathogenic | 0.5567 | ambiguous | -0.199 | Destabilizing | 0.7 | D | 0.722 | deleterious | N | 0.485271028 | None | None | N |
D/H | 0.7781 | likely_pathogenic | 0.7302 | pathogenic | 0.282 | Stabilizing | 0.984 | D | 0.825 | deleterious | N | 0.510833258 | None | None | N |
D/I | 0.8961 | likely_pathogenic | 0.8682 | pathogenic | 0.304 | Stabilizing | 0.956 | D | 0.776 | deleterious | None | None | None | None | N |
D/K | 0.9437 | likely_pathogenic | 0.9322 | pathogenic | 0.38 | Stabilizing | 0.844 | D | 0.752 | deleterious | None | None | None | None | N |
D/L | 0.8556 | likely_pathogenic | 0.8242 | pathogenic | 0.304 | Stabilizing | 0.916 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/M | 0.9455 | likely_pathogenic | 0.9268 | pathogenic | 0.205 | Stabilizing | 0.996 | D | 0.823 | deleterious | None | None | None | None | N |
D/N | 0.2502 | likely_benign | 0.2188 | benign | 0.194 | Stabilizing | 0.891 | D | 0.768 | deleterious | N | 0.495325088 | None | None | N |
D/P | 0.9344 | likely_pathogenic | 0.9276 | pathogenic | 0.209 | Stabilizing | 0.956 | D | 0.775 | deleterious | None | None | None | None | N |
D/Q | 0.9031 | likely_pathogenic | 0.875 | pathogenic | 0.203 | Stabilizing | 0.844 | D | 0.797 | deleterious | None | None | None | None | N |
D/R | 0.9525 | likely_pathogenic | 0.9423 | pathogenic | 0.577 | Stabilizing | 0.916 | D | 0.723 | deleterious | None | None | None | None | N |
D/S | 0.4468 | ambiguous | 0.387 | ambiguous | 0.073 | Stabilizing | 0.607 | D | 0.689 | prob.delet. | None | None | None | None | N |
D/T | 0.7106 | likely_pathogenic | 0.6765 | pathogenic | 0.191 | Stabilizing | 0.916 | D | 0.77 | deleterious | None | None | None | None | N |
D/V | 0.7521 | likely_pathogenic | 0.6977 | pathogenic | 0.209 | Stabilizing | 0.891 | D | 0.719 | prob.delet. | N | 0.493918309 | None | None | N |
D/W | 0.9761 | likely_pathogenic | 0.9737 | pathogenic | -0.005 | Destabilizing | 0.996 | D | 0.787 | deleterious | None | None | None | None | N |
D/Y | 0.5565 | ambiguous | 0.5162 | ambiguous | 0.155 | Stabilizing | 0.995 | D | 0.771 | deleterious | N | 0.489996626 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.