Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19579 | 58960;58961;58962 | chr2:178593473;178593472;178593471 | chr2:179458200;179458199;179458198 |
N2AB | 17938 | 54037;54038;54039 | chr2:178593473;178593472;178593471 | chr2:179458200;179458199;179458198 |
N2A | 17011 | 51256;51257;51258 | chr2:178593473;178593472;178593471 | chr2:179458200;179458199;179458198 |
N2B | 10514 | 31765;31766;31767 | chr2:178593473;178593472;178593471 | chr2:179458200;179458199;179458198 |
Novex-1 | 10639 | 32140;32141;32142 | chr2:178593473;178593472;178593471 | chr2:179458200;179458199;179458198 |
Novex-2 | 10706 | 32341;32342;32343 | chr2:178593473;178593472;178593471 | chr2:179458200;179458199;179458198 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.999 | N | 0.809 | 0.516 | 0.718557029062 | gnomAD-4.0.0 | 1.37633E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.20166E-05 | 1.66539E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3023 | likely_benign | 0.3006 | benign | -0.76 | Destabilizing | 0.997 | D | 0.523 | neutral | N | 0.521209676 | None | None | I |
V/C | 0.7621 | likely_pathogenic | 0.7812 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/D | 0.706 | likely_pathogenic | 0.703 | pathogenic | -0.391 | Destabilizing | 0.999 | D | 0.809 | deleterious | N | 0.498587619 | None | None | I |
V/E | 0.4796 | ambiguous | 0.4761 | ambiguous | -0.499 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | I |
V/F | 0.3241 | likely_benign | 0.3299 | benign | -0.991 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.491079201 | None | None | I |
V/G | 0.4109 | ambiguous | 0.4077 | ambiguous | -0.909 | Destabilizing | 0.999 | D | 0.781 | deleterious | N | 0.509690435 | None | None | I |
V/H | 0.7356 | likely_pathogenic | 0.7485 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
V/I | 0.091 | likely_benign | 0.0926 | benign | -0.512 | Destabilizing | 0.994 | D | 0.579 | neutral | N | 0.509051242 | None | None | I |
V/K | 0.3524 | ambiguous | 0.3765 | ambiguous | -0.432 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | I |
V/L | 0.2865 | likely_benign | 0.3024 | benign | -0.512 | Destabilizing | 0.994 | D | 0.597 | neutral | N | 0.470097656 | None | None | I |
V/M | 0.2644 | likely_benign | 0.2651 | benign | -0.361 | Destabilizing | 0.999 | D | 0.733 | deleterious | None | None | None | None | I |
V/N | 0.5359 | ambiguous | 0.5407 | ambiguous | -0.201 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | I |
V/P | 0.3246 | likely_benign | 0.3449 | ambiguous | -0.56 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
V/Q | 0.4279 | ambiguous | 0.4477 | ambiguous | -0.502 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | I |
V/R | 0.3333 | likely_benign | 0.3596 | ambiguous | 0.111 | Stabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
V/S | 0.434 | ambiguous | 0.4307 | ambiguous | -0.64 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | I |
V/T | 0.3029 | likely_benign | 0.3108 | benign | -0.647 | Destabilizing | 0.998 | D | 0.707 | prob.delet. | None | None | None | None | I |
V/W | 0.9044 | likely_pathogenic | 0.9082 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
V/Y | 0.6864 | likely_pathogenic | 0.7049 | pathogenic | -0.702 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.