Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19582 | 58969;58970;58971 | chr2:178593464;178593463;178593462 | chr2:179458191;179458190;179458189 |
N2AB | 17941 | 54046;54047;54048 | chr2:178593464;178593463;178593462 | chr2:179458191;179458190;179458189 |
N2A | 17014 | 51265;51266;51267 | chr2:178593464;178593463;178593462 | chr2:179458191;179458190;179458189 |
N2B | 10517 | 31774;31775;31776 | chr2:178593464;178593463;178593462 | chr2:179458191;179458190;179458189 |
Novex-1 | 10642 | 32149;32150;32151 | chr2:178593464;178593463;178593462 | chr2:179458191;179458190;179458189 |
Novex-2 | 10709 | 32350;32351;32352 | chr2:178593464;178593463;178593462 | chr2:179458191;179458190;179458189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.799 | 0.441 | 0.534719010399 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5606 | ambiguous | 0.5688 | pathogenic | -1.003 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
A/D | 0.8349 | likely_pathogenic | 0.7731 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
A/E | 0.5837 | likely_pathogenic | 0.5253 | ambiguous | -2.042 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.508736746 | None | None | N |
A/F | 0.667 | likely_pathogenic | 0.6187 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
A/G | 0.2678 | likely_benign | 0.2581 | benign | -0.915 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.519069547 | None | None | N |
A/H | 0.7152 | likely_pathogenic | 0.6843 | pathogenic | -0.962 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
A/I | 0.5434 | ambiguous | 0.4992 | ambiguous | -0.537 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
A/K | 0.6199 | likely_pathogenic | 0.5678 | pathogenic | -0.991 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/L | 0.5316 | ambiguous | 0.4749 | ambiguous | -0.537 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
A/M | 0.4869 | ambiguous | 0.447 | ambiguous | -0.344 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
A/N | 0.6766 | likely_pathogenic | 0.6317 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
A/P | 0.2348 | likely_benign | 0.2225 | benign | -0.58 | Destabilizing | 1.0 | D | 0.85 | deleterious | N | 0.448123 | None | None | N |
A/Q | 0.465 | ambiguous | 0.4502 | ambiguous | -1.184 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
A/R | 0.5411 | ambiguous | 0.4806 | ambiguous | -0.519 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
A/S | 0.1501 | likely_benign | 0.1433 | benign | -0.978 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.480428274 | None | None | N |
A/T | 0.2552 | likely_benign | 0.2204 | benign | -1.012 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.500711803 | None | None | N |
A/V | 0.3374 | likely_benign | 0.2875 | benign | -0.58 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.498901377 | None | None | N |
A/W | 0.9397 | likely_pathogenic | 0.926 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
A/Y | 0.7682 | likely_pathogenic | 0.7371 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.