Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19585 | 58978;58979;58980 | chr2:178593455;178593454;178593453 | chr2:179458182;179458181;179458180 |
N2AB | 17944 | 54055;54056;54057 | chr2:178593455;178593454;178593453 | chr2:179458182;179458181;179458180 |
N2A | 17017 | 51274;51275;51276 | chr2:178593455;178593454;178593453 | chr2:179458182;179458181;179458180 |
N2B | 10520 | 31783;31784;31785 | chr2:178593455;178593454;178593453 | chr2:179458182;179458181;179458180 |
Novex-1 | 10645 | 32158;32159;32160 | chr2:178593455;178593454;178593453 | chr2:179458182;179458181;179458180 |
Novex-2 | 10712 | 32359;32360;32361 | chr2:178593455;178593454;178593453 | chr2:179458182;179458181;179458180 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.625 | N | 0.395 | 0.135 | 0.257292322809 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1416 | likely_benign | 0.1635 | benign | -0.542 | Destabilizing | 0.007 | N | 0.138 | neutral | None | None | None | None | N |
Q/C | 0.501 | ambiguous | 0.5643 | pathogenic | 0.129 | Stabilizing | 0.993 | D | 0.401 | neutral | None | None | None | None | N |
Q/D | 0.5135 | ambiguous | 0.5716 | pathogenic | -0.297 | Destabilizing | 0.915 | D | 0.4 | neutral | None | None | None | None | N |
Q/E | 0.0959 | likely_benign | 0.1047 | benign | -0.256 | Destabilizing | 0.625 | D | 0.395 | neutral | N | 0.478768407 | None | None | N |
Q/F | 0.5982 | likely_pathogenic | 0.6512 | pathogenic | -0.37 | Destabilizing | 0.949 | D | 0.435 | neutral | None | None | None | None | N |
Q/G | 0.35 | ambiguous | 0.3905 | ambiguous | -0.847 | Destabilizing | 0.728 | D | 0.386 | neutral | None | None | None | None | N |
Q/H | 0.2908 | likely_benign | 0.3199 | benign | -0.788 | Destabilizing | 0.989 | D | 0.395 | neutral | N | 0.510958184 | None | None | N |
Q/I | 0.2675 | likely_benign | 0.2974 | benign | 0.209 | Stabilizing | 0.904 | D | 0.423 | neutral | None | None | None | None | N |
Q/K | 0.1128 | likely_benign | 0.1153 | benign | -0.327 | Destabilizing | 0.801 | D | 0.414 | neutral | N | 0.420568253 | None | None | N |
Q/L | 0.1402 | likely_benign | 0.145 | benign | 0.209 | Stabilizing | 0.454 | N | 0.352 | neutral | N | 0.506840443 | None | None | N |
Q/M | 0.2523 | likely_benign | 0.2787 | benign | 0.668 | Stabilizing | 0.325 | N | 0.287 | neutral | None | None | None | None | N |
Q/N | 0.336 | likely_benign | 0.3809 | ambiguous | -0.695 | Destabilizing | 0.974 | D | 0.401 | neutral | None | None | None | None | N |
Q/P | 0.1154 | likely_benign | 0.1287 | benign | -0.01 | Destabilizing | 0.966 | D | 0.425 | neutral | N | 0.421723046 | None | None | N |
Q/R | 0.1301 | likely_benign | 0.1342 | benign | -0.232 | Destabilizing | 0.891 | D | 0.437 | neutral | N | 0.446253344 | None | None | N |
Q/S | 0.208 | likely_benign | 0.2464 | benign | -0.756 | Destabilizing | 0.525 | D | 0.367 | neutral | None | None | None | None | N |
Q/T | 0.1591 | likely_benign | 0.1757 | benign | -0.534 | Destabilizing | 0.842 | D | 0.382 | neutral | None | None | None | None | N |
Q/V | 0.182 | likely_benign | 0.1994 | benign | -0.01 | Destabilizing | 0.728 | D | 0.395 | neutral | None | None | None | None | N |
Q/W | 0.6796 | likely_pathogenic | 0.7029 | pathogenic | -0.264 | Destabilizing | 0.998 | D | 0.447 | neutral | None | None | None | None | N |
Q/Y | 0.4331 | ambiguous | 0.4814 | ambiguous | -0.068 | Destabilizing | 0.991 | D | 0.425 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.