Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19587 | 58984;58985;58986 | chr2:178593449;178593448;178593447 | chr2:179458176;179458175;179458174 |
N2AB | 17946 | 54061;54062;54063 | chr2:178593449;178593448;178593447 | chr2:179458176;179458175;179458174 |
N2A | 17019 | 51280;51281;51282 | chr2:178593449;178593448;178593447 | chr2:179458176;179458175;179458174 |
N2B | 10522 | 31789;31790;31791 | chr2:178593449;178593448;178593447 | chr2:179458176;179458175;179458174 |
Novex-1 | 10647 | 32164;32165;32166 | chr2:178593449;178593448;178593447 | chr2:179458176;179458175;179458174 |
Novex-2 | 10714 | 32365;32366;32367 | chr2:178593449;178593448;178593447 | chr2:179458176;179458175;179458174 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs916546048 | None | None | N | 0.159 | 0.053 | 0.163833314356 | gnomAD-4.0.0 | 1.36952E-06 | None | None | None | None | N | None | 2.99383E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99666E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1203 | likely_benign | 0.1312 | benign | -0.969 | Destabilizing | 0.016 | N | 0.401 | neutral | None | None | None | None | N |
I/C | 0.4561 | ambiguous | 0.4722 | ambiguous | -0.693 | Destabilizing | 0.676 | D | 0.597 | neutral | None | None | None | None | N |
I/D | 0.3473 | ambiguous | 0.3675 | ambiguous | -0.423 | Destabilizing | 0.072 | N | 0.637 | neutral | None | None | None | None | N |
I/E | 0.2184 | likely_benign | 0.2362 | benign | -0.496 | Destabilizing | 0.038 | N | 0.539 | neutral | None | None | None | None | N |
I/F | 0.1257 | likely_benign | 0.1201 | benign | -0.821 | Destabilizing | 0.171 | N | 0.59 | neutral | N | 0.453699391 | None | None | N |
I/G | 0.3815 | ambiguous | 0.4189 | ambiguous | -1.182 | Destabilizing | 0.072 | N | 0.549 | neutral | None | None | None | None | N |
I/H | 0.2444 | likely_benign | 0.2516 | benign | -0.459 | Destabilizing | 0.676 | D | 0.597 | neutral | None | None | None | None | N |
I/K | 0.1601 | likely_benign | 0.1714 | benign | -0.618 | Destabilizing | None | N | 0.483 | neutral | None | None | None | None | N |
I/L | 0.0894 | likely_benign | 0.0896 | benign | -0.513 | Destabilizing | 0.005 | N | 0.304 | neutral | N | 0.46133744 | None | None | N |
I/M | 0.0787 | likely_benign | 0.0801 | benign | -0.448 | Destabilizing | 0.171 | N | 0.561 | neutral | N | 0.494276578 | None | None | N |
I/N | 0.1335 | likely_benign | 0.1413 | benign | -0.386 | Destabilizing | 0.171 | N | 0.635 | neutral | N | 0.463876313 | None | None | N |
I/P | 0.8635 | likely_pathogenic | 0.8548 | pathogenic | -0.631 | Destabilizing | 0.356 | N | 0.631 | neutral | None | None | None | None | N |
I/Q | 0.1796 | likely_benign | 0.1987 | benign | -0.62 | Destabilizing | 0.12 | N | 0.623 | neutral | None | None | None | None | N |
I/R | 0.1399 | likely_benign | 0.1387 | benign | -0.029 | Destabilizing | 0.12 | N | 0.634 | neutral | None | None | None | None | N |
I/S | 0.1257 | likely_benign | 0.131 | benign | -0.879 | Destabilizing | 0.029 | N | 0.503 | neutral | N | 0.432993258 | None | None | N |
I/T | 0.0753 | likely_benign | 0.0796 | benign | -0.843 | Destabilizing | None | N | 0.271 | neutral | N | 0.372195516 | None | None | N |
I/V | 0.0574 | likely_benign | 0.0581 | benign | -0.631 | Destabilizing | None | N | 0.159 | neutral | N | 0.411447337 | None | None | N |
I/W | 0.6476 | likely_pathogenic | 0.6331 | pathogenic | -0.834 | Destabilizing | 0.864 | D | 0.634 | neutral | None | None | None | None | N |
I/Y | 0.3853 | ambiguous | 0.3766 | ambiguous | -0.602 | Destabilizing | 0.356 | N | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.