Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19598 | 59017;59018;59019 | chr2:178593416;178593415;178593414 | chr2:179458143;179458142;179458141 |
N2AB | 17957 | 54094;54095;54096 | chr2:178593416;178593415;178593414 | chr2:179458143;179458142;179458141 |
N2A | 17030 | 51313;51314;51315 | chr2:178593416;178593415;178593414 | chr2:179458143;179458142;179458141 |
N2B | 10533 | 31822;31823;31824 | chr2:178593416;178593415;178593414 | chr2:179458143;179458142;179458141 |
Novex-1 | 10658 | 32197;32198;32199 | chr2:178593416;178593415;178593414 | chr2:179458143;179458142;179458141 |
Novex-2 | 10725 | 32398;32399;32400 | chr2:178593416;178593415;178593414 | chr2:179458143;179458142;179458141 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1375428423 | None | 0.198 | N | 0.159 | 0.174 | 0.315314060047 | gnomAD-4.0.0 | 1.59235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85972E-06 | 0 | 0 |
V/L | rs1375428423 | None | 0.9 | N | 0.379 | 0.224 | 0.297031009988 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
V/L | rs1375428423 | None | 0.9 | N | 0.379 | 0.224 | 0.297031009988 | gnomAD-4.0.0 | 6.40953E-06 | None | None | None | None | N | None | 0 | 1.69612E-05 | None | 0 | 0 | None | 0 | 0 | 9.57685E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8548 | likely_pathogenic | 0.8823 | pathogenic | -2.056 | Highly Destabilizing | 0.948 | D | 0.656 | neutral | N | 0.49106011 | None | None | N |
V/C | 0.9476 | likely_pathogenic | 0.961 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/D | 0.9987 | likely_pathogenic | 0.9992 | pathogenic | -3.0 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
V/E | 0.9952 | likely_pathogenic | 0.9965 | pathogenic | -2.666 | Highly Destabilizing | 0.999 | D | 0.857 | deleterious | D | 0.526054079 | None | None | N |
V/F | 0.9085 | likely_pathogenic | 0.9208 | pathogenic | -1.139 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/G | 0.9481 | likely_pathogenic | 0.9589 | pathogenic | -2.672 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | N | 0.514533189 | None | None | N |
V/H | 0.9984 | likely_pathogenic | 0.9988 | pathogenic | -2.718 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/I | 0.0937 | likely_benign | 0.1004 | benign | -0.257 | Destabilizing | 0.198 | N | 0.159 | neutral | N | 0.452293882 | None | None | N |
V/K | 0.9966 | likely_pathogenic | 0.9976 | pathogenic | -1.549 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
V/L | 0.3498 | ambiguous | 0.4076 | ambiguous | -0.257 | Destabilizing | 0.9 | D | 0.379 | neutral | N | 0.392330354 | None | None | N |
V/M | 0.7438 | likely_pathogenic | 0.7763 | pathogenic | -0.451 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
V/N | 0.9955 | likely_pathogenic | 0.9969 | pathogenic | -2.295 | Highly Destabilizing | 0.999 | D | 0.903 | deleterious | None | None | None | None | N |
V/P | 0.9936 | likely_pathogenic | 0.995 | pathogenic | -0.839 | Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
V/Q | 0.9942 | likely_pathogenic | 0.9958 | pathogenic | -1.871 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
V/R | 0.9937 | likely_pathogenic | 0.9953 | pathogenic | -1.833 | Destabilizing | 0.999 | D | 0.904 | deleterious | None | None | None | None | N |
V/S | 0.981 | likely_pathogenic | 0.9862 | pathogenic | -2.737 | Highly Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
V/T | 0.9349 | likely_pathogenic | 0.9503 | pathogenic | -2.238 | Highly Destabilizing | 0.992 | D | 0.639 | neutral | None | None | None | None | N |
V/W | 0.9989 | likely_pathogenic | 0.9992 | pathogenic | -1.719 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/Y | 0.9939 | likely_pathogenic | 0.9949 | pathogenic | -1.358 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.