Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19599 | 59020;59021;59022 | chr2:178593413;178593412;178593411 | chr2:179458140;179458139;179458138 |
N2AB | 17958 | 54097;54098;54099 | chr2:178593413;178593412;178593411 | chr2:179458140;179458139;179458138 |
N2A | 17031 | 51316;51317;51318 | chr2:178593413;178593412;178593411 | chr2:179458140;179458139;179458138 |
N2B | 10534 | 31825;31826;31827 | chr2:178593413;178593412;178593411 | chr2:179458140;179458139;179458138 |
Novex-1 | 10659 | 32200;32201;32202 | chr2:178593413;178593412;178593411 | chr2:179458140;179458139;179458138 |
Novex-2 | 10726 | 32401;32402;32403 | chr2:178593413;178593412;178593411 | chr2:179458140;179458139;179458138 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs367816473 | 0.193 | 0.002 | D | 0.349 | 0.16 | None | gnomAD-2.1.1 | 4.29E-05 | None | None | None | None | N | None | 4.54921E-04 | 2.84E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs367816473 | 0.193 | 0.002 | D | 0.349 | 0.16 | None | gnomAD-3.1.2 | 1.71012E-04 | None | None | None | None | N | None | 5.31221E-04 | 1.96541E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.79846E-04 |
T/I | rs367816473 | 0.193 | 0.002 | D | 0.349 | 0.16 | None | gnomAD-4.0.0 | 2.78956E-05 | None | None | None | None | N | None | 4.54193E-04 | 8.34168E-05 | None | 0 | 0 | None | 0 | 0 | 8.47761E-07 | 0 | 8.00897E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0947 | likely_benign | 0.1019 | benign | -0.937 | Destabilizing | 0.027 | N | 0.286 | neutral | N | 0.502416058 | None | None | N |
T/C | 0.2784 | likely_benign | 0.3336 | benign | -0.516 | Destabilizing | 0.824 | D | 0.536 | neutral | None | None | None | None | N |
T/D | 0.4617 | ambiguous | 0.5301 | ambiguous | -0.867 | Destabilizing | 0.081 | N | 0.457 | neutral | None | None | None | None | N |
T/E | 0.3098 | likely_benign | 0.3504 | ambiguous | -0.702 | Destabilizing | 0.081 | N | 0.454 | neutral | None | None | None | None | N |
T/F | 0.1804 | likely_benign | 0.2257 | benign | -0.538 | Destabilizing | 0.555 | D | 0.583 | neutral | None | None | None | None | N |
T/G | 0.2482 | likely_benign | 0.2915 | benign | -1.34 | Destabilizing | 0.081 | N | 0.504 | neutral | None | None | None | None | N |
T/H | 0.2326 | likely_benign | 0.2585 | benign | -1.468 | Destabilizing | 0.824 | D | 0.601 | neutral | None | None | None | None | N |
T/I | 0.1278 | likely_benign | 0.1405 | benign | 0.105 | Stabilizing | 0.002 | N | 0.349 | neutral | D | 0.523023404 | None | None | N |
T/K | 0.2567 | likely_benign | 0.2642 | benign | -0.49 | Destabilizing | 0.081 | N | 0.461 | neutral | None | None | None | None | N |
T/L | 0.0949 | likely_benign | 0.1031 | benign | 0.105 | Stabilizing | 0.035 | N | 0.439 | neutral | None | None | None | None | N |
T/M | 0.0884 | likely_benign | 0.0859 | benign | 0.075 | Stabilizing | 0.555 | D | 0.538 | neutral | None | None | None | None | N |
T/N | 0.1406 | likely_benign | 0.149 | benign | -0.962 | Destabilizing | 0.062 | N | 0.415 | neutral | N | 0.512574337 | None | None | N |
T/P | 0.7819 | likely_pathogenic | 0.7825 | pathogenic | -0.21 | Destabilizing | 0.317 | N | 0.528 | neutral | N | 0.515632372 | None | None | N |
T/Q | 0.2214 | likely_benign | 0.2299 | benign | -0.783 | Destabilizing | 0.38 | N | 0.53 | neutral | None | None | None | None | N |
T/R | 0.214 | likely_benign | 0.2258 | benign | -0.656 | Destabilizing | 0.001 | N | 0.362 | neutral | None | None | None | None | N |
T/S | 0.0955 | likely_benign | 0.1104 | benign | -1.218 | Destabilizing | None | N | 0.202 | neutral | N | 0.40984704 | None | None | N |
T/V | 0.1164 | likely_benign | 0.1238 | benign | -0.21 | Destabilizing | 0.001 | N | 0.185 | neutral | None | None | None | None | N |
T/W | 0.516 | ambiguous | 0.6031 | pathogenic | -0.665 | Destabilizing | 0.935 | D | 0.638 | neutral | None | None | None | None | N |
T/Y | 0.224 | likely_benign | 0.2744 | benign | -0.308 | Destabilizing | 0.555 | D | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.