Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19601 | 59026;59027;59028 | chr2:178593407;178593406;178593405 | chr2:179458134;179458133;179458132 |
N2AB | 17960 | 54103;54104;54105 | chr2:178593407;178593406;178593405 | chr2:179458134;179458133;179458132 |
N2A | 17033 | 51322;51323;51324 | chr2:178593407;178593406;178593405 | chr2:179458134;179458133;179458132 |
N2B | 10536 | 31831;31832;31833 | chr2:178593407;178593406;178593405 | chr2:179458134;179458133;179458132 |
Novex-1 | 10661 | 32206;32207;32208 | chr2:178593407;178593406;178593405 | chr2:179458134;179458133;179458132 |
Novex-2 | 10728 | 32407;32408;32409 | chr2:178593407;178593406;178593405 | chr2:179458134;179458133;179458132 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.201 | N | 0.394 | 0.162 | 0.16115917748 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1818 | likely_benign | 0.2172 | benign | -0.541 | Destabilizing | 0.25 | N | 0.433 | neutral | None | None | None | None | N |
N/C | 0.2447 | likely_benign | 0.2666 | benign | 0.225 | Stabilizing | 0.992 | D | 0.57 | neutral | None | None | None | None | N |
N/D | 0.187 | likely_benign | 0.2074 | benign | -0.153 | Destabilizing | 0.201 | N | 0.399 | neutral | N | 0.471687719 | None | None | N |
N/E | 0.2404 | likely_benign | 0.2901 | benign | -0.117 | Destabilizing | 0.009 | N | 0.191 | neutral | None | None | None | None | N |
N/F | 0.4533 | ambiguous | 0.4914 | ambiguous | -0.531 | Destabilizing | 0.85 | D | 0.584 | neutral | None | None | None | None | N |
N/G | 0.2285 | likely_benign | 0.2581 | benign | -0.819 | Destabilizing | 0.4 | N | 0.371 | neutral | None | None | None | None | N |
N/H | 0.103 | likely_benign | 0.1097 | benign | -0.78 | Destabilizing | 0.896 | D | 0.468 | neutral | N | 0.489409475 | None | None | N |
N/I | 0.1831 | likely_benign | 0.2076 | benign | 0.132 | Stabilizing | 0.379 | N | 0.583 | neutral | N | 0.49570073 | None | None | N |
N/K | 0.1724 | likely_benign | 0.2052 | benign | -0.228 | Destabilizing | 0.004 | N | 0.169 | neutral | N | 0.415159646 | None | None | N |
N/L | 0.1987 | likely_benign | 0.2266 | benign | 0.132 | Stabilizing | 0.005 | N | 0.464 | neutral | None | None | None | None | N |
N/M | 0.2471 | likely_benign | 0.2788 | benign | 0.425 | Stabilizing | 0.85 | D | 0.569 | neutral | None | None | None | None | N |
N/P | 0.6019 | likely_pathogenic | 0.6451 | pathogenic | -0.063 | Destabilizing | 0.92 | D | 0.617 | neutral | None | None | None | None | N |
N/Q | 0.1902 | likely_benign | 0.2277 | benign | -0.606 | Destabilizing | 0.447 | N | 0.415 | neutral | None | None | None | None | N |
N/R | 0.2077 | likely_benign | 0.2424 | benign | -0.291 | Destabilizing | 0.447 | N | 0.356 | neutral | None | None | None | None | N |
N/S | 0.0968 | likely_benign | 0.1064 | benign | -0.522 | Destabilizing | 0.201 | N | 0.394 | neutral | N | 0.425509926 | None | None | N |
N/T | 0.1183 | likely_benign | 0.1368 | benign | -0.316 | Destabilizing | 0.549 | D | 0.371 | neutral | N | 0.430609101 | None | None | N |
N/V | 0.1841 | likely_benign | 0.2148 | benign | -0.063 | Destabilizing | 0.447 | N | 0.489 | neutral | None | None | None | None | N |
N/W | 0.6638 | likely_pathogenic | 0.6979 | pathogenic | -0.425 | Destabilizing | 0.992 | D | 0.618 | neutral | None | None | None | None | N |
N/Y | 0.1586 | likely_benign | 0.1633 | benign | -0.207 | Destabilizing | 0.963 | D | 0.587 | neutral | N | 0.513286413 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.