Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19602 | 59029;59030;59031 | chr2:178593404;178593403;178593402 | chr2:179458131;179458130;179458129 |
N2AB | 17961 | 54106;54107;54108 | chr2:178593404;178593403;178593402 | chr2:179458131;179458130;179458129 |
N2A | 17034 | 51325;51326;51327 | chr2:178593404;178593403;178593402 | chr2:179458131;179458130;179458129 |
N2B | 10537 | 31834;31835;31836 | chr2:178593404;178593403;178593402 | chr2:179458131;179458130;179458129 |
Novex-1 | 10662 | 32209;32210;32211 | chr2:178593404;178593403;178593402 | chr2:179458131;179458130;179458129 |
Novex-2 | 10729 | 32410;32411;32412 | chr2:178593404;178593403;178593402 | chr2:179458131;179458130;179458129 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.117 | N | 0.474 | 0.148 | 0.228597637076 | gnomAD-4.0.0 | 1.59228E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2924 | likely_benign | 0.3272 | benign | -0.46 | Destabilizing | 0.035 | N | 0.399 | neutral | None | None | None | None | N |
K/C | 0.6588 | likely_pathogenic | 0.7095 | pathogenic | -0.467 | Destabilizing | 0.935 | D | 0.595 | neutral | None | None | None | None | N |
K/D | 0.6534 | likely_pathogenic | 0.6788 | pathogenic | -0.519 | Destabilizing | 0.149 | N | 0.513 | neutral | None | None | None | None | N |
K/E | 0.203 | likely_benign | 0.1984 | benign | -0.414 | Destabilizing | 0.027 | N | 0.461 | neutral | N | 0.413044848 | None | None | N |
K/F | 0.725 | likely_pathogenic | 0.7527 | pathogenic | -0.276 | Destabilizing | 0.791 | D | 0.584 | neutral | None | None | None | None | N |
K/G | 0.5591 | ambiguous | 0.5914 | pathogenic | -0.76 | Destabilizing | 0.149 | N | 0.502 | neutral | None | None | None | None | N |
K/H | 0.3498 | ambiguous | 0.3769 | ambiguous | -0.939 | Destabilizing | 0.555 | D | 0.59 | neutral | None | None | None | None | N |
K/I | 0.2664 | likely_benign | 0.2965 | benign | 0.305 | Stabilizing | 0.555 | D | 0.597 | neutral | None | None | None | None | N |
K/L | 0.3055 | likely_benign | 0.3188 | benign | 0.305 | Stabilizing | 0.149 | N | 0.5 | neutral | None | None | None | None | N |
K/M | 0.2253 | likely_benign | 0.2387 | benign | -0.146 | Destabilizing | 0.741 | D | 0.587 | neutral | N | 0.520905818 | None | None | N |
K/N | 0.5414 | ambiguous | 0.5576 | ambiguous | -0.331 | Destabilizing | 0.117 | N | 0.495 | neutral | N | 0.50934203 | None | None | N |
K/P | 0.2528 | likely_benign | 0.3367 | benign | 0.077 | Stabilizing | None | N | 0.217 | neutral | None | None | None | None | N |
K/Q | 0.1405 | likely_benign | 0.1475 | benign | -0.31 | Destabilizing | 0.005 | N | 0.273 | neutral | N | 0.458798567 | None | None | N |
K/R | 0.0787 | likely_benign | 0.0783 | benign | -0.403 | Destabilizing | None | N | 0.137 | neutral | N | 0.430803889 | None | None | N |
K/S | 0.4727 | ambiguous | 0.502 | ambiguous | -0.732 | Destabilizing | 0.149 | N | 0.442 | neutral | None | None | None | None | N |
K/T | 0.2127 | likely_benign | 0.2279 | benign | -0.444 | Destabilizing | 0.117 | N | 0.474 | neutral | N | 0.508821955 | None | None | N |
K/V | 0.2535 | likely_benign | 0.2833 | benign | 0.077 | Stabilizing | 0.149 | N | 0.56 | neutral | None | None | None | None | N |
K/W | 0.7685 | likely_pathogenic | 0.8018 | pathogenic | -0.307 | Destabilizing | 0.935 | D | 0.641 | neutral | None | None | None | None | N |
K/Y | 0.5937 | likely_pathogenic | 0.6228 | pathogenic | -0.024 | Destabilizing | 0.791 | D | 0.587 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.