Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19612 | 59059;59060;59061 | chr2:178593374;178593373;178593372 | chr2:179458101;179458100;179458099 |
N2AB | 17971 | 54136;54137;54138 | chr2:178593374;178593373;178593372 | chr2:179458101;179458100;179458099 |
N2A | 17044 | 51355;51356;51357 | chr2:178593374;178593373;178593372 | chr2:179458101;179458100;179458099 |
N2B | 10547 | 31864;31865;31866 | chr2:178593374;178593373;178593372 | chr2:179458101;179458100;179458099 |
Novex-1 | 10672 | 32239;32240;32241 | chr2:178593374;178593373;178593372 | chr2:179458101;179458100;179458099 |
Novex-2 | 10739 | 32440;32441;32442 | chr2:178593374;178593373;178593372 | chr2:179458101;179458100;179458099 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.272 | N | 0.797 | 0.243 | 0.436886369515 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85958E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.348 | ambiguous | 0.3471 | ambiguous | -0.965 | Destabilizing | None | N | 0.564 | neutral | None | None | None | None | N |
N/C | 0.3019 | likely_benign | 0.3194 | benign | -0.212 | Destabilizing | 0.883 | D | 0.755 | deleterious | None | None | None | None | N |
N/D | 0.3153 | likely_benign | 0.3106 | benign | -1.287 | Destabilizing | 0.175 | N | 0.491 | neutral | D | 0.52407941 | None | None | N |
N/E | 0.7074 | likely_pathogenic | 0.736 | pathogenic | -1.084 | Destabilizing | 0.22 | N | 0.562 | neutral | None | None | None | None | N |
N/F | 0.7747 | likely_pathogenic | 0.7767 | pathogenic | -0.351 | Destabilizing | 0.667 | D | 0.769 | deleterious | None | None | None | None | N |
N/G | 0.231 | likely_benign | 0.2352 | benign | -1.378 | Destabilizing | None | N | 0.168 | neutral | None | None | None | None | N |
N/H | 0.145 | likely_benign | 0.1492 | benign | -0.984 | Destabilizing | 0.602 | D | 0.626 | neutral | N | 0.502530701 | None | None | N |
N/I | 0.7242 | likely_pathogenic | 0.7539 | pathogenic | 0.133 | Stabilizing | 0.272 | N | 0.797 | deleterious | N | 0.476497346 | None | None | N |
N/K | 0.5194 | ambiguous | 0.5464 | ambiguous | -0.422 | Destabilizing | 0.096 | N | 0.579 | neutral | N | 0.49764217 | None | None | N |
N/L | 0.5682 | likely_pathogenic | 0.5677 | pathogenic | 0.133 | Stabilizing | 0.124 | N | 0.764 | deleterious | None | None | None | None | N |
N/M | 0.6443 | likely_pathogenic | 0.65 | pathogenic | 0.395 | Stabilizing | 0.667 | D | 0.723 | prob.delet. | None | None | None | None | N |
N/P | 0.9833 | likely_pathogenic | 0.9818 | pathogenic | -0.204 | Destabilizing | 0.667 | D | 0.776 | deleterious | None | None | None | None | N |
N/Q | 0.503 | ambiguous | 0.5349 | ambiguous | -0.891 | Destabilizing | 0.497 | N | 0.681 | prob.neutral | None | None | None | None | N |
N/R | 0.4356 | ambiguous | 0.4503 | ambiguous | -0.667 | Destabilizing | 0.22 | N | 0.657 | neutral | None | None | None | None | N |
N/S | 0.0996 | likely_benign | 0.0986 | benign | -1.229 | Destabilizing | 0.001 | N | 0.171 | neutral | N | 0.481749997 | None | None | N |
N/T | 0.2801 | likely_benign | 0.2755 | benign | -0.834 | Destabilizing | 0.001 | N | 0.191 | neutral | N | 0.50532029 | None | None | N |
N/V | 0.6317 | likely_pathogenic | 0.6543 | pathogenic | -0.204 | Destabilizing | 0.124 | N | 0.768 | deleterious | None | None | None | None | N |
N/W | 0.8793 | likely_pathogenic | 0.8927 | pathogenic | -0.212 | Destabilizing | 0.958 | D | 0.761 | deleterious | None | None | None | None | N |
N/Y | 0.289 | likely_benign | 0.2951 | benign | 0.072 | Stabilizing | 0.602 | D | 0.743 | deleterious | N | 0.506744442 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.